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Protein
Submitted name:

LSY-2-Like

Gene

lsl-1

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
LSY-2-LikeImported
Gene namesi
Name:lsl-1Imported
ORF Names:CELE_F52F12.4Imported, F52F12.4Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi

Organism-specific databases

WormBaseiF52F12.4 ; CE36164 ; WBGene00009937 ; lsl-1

PTM / Processingi

Proteomic databases

EPDiO02273
PaxDbiO02273

Expressioni

Gene expression databases

BgeeiWBGene00009937

Interactioni

Protein-protein interaction databases

IntActiO02273, 32 interactors
STRINGi6239.F52F12.4

Structurei

3D structure databases

ProteinModelPortaliO02273
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini37 – 64C2H2-typeInterPro annotationAdd BLAST28
Domaini65 – 92C2H2-typeInterPro annotationAdd BLAST28
Domaini93 – 120C2H2-typeInterPro annotationAdd BLAST28

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00910000144537
HOGENOMiHOG000017415
InParanoidiO02273
OMAiMNYKGLQ
OrthoDBiEOG091G0HQP
PhylomeDBiO02273

Family and domain databases

InterProiView protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 5 hits
SUPFAMiSSF57667 SSF57667, 2 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 4 hits
PS50157 ZINC_FINGER_C2H2_2, 3 hits

Sequencei

Sequence statusi: Complete.

O02273-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSIIDDRTDP SYDGEDYEAS ITFGTYQQEE VAPFAVHQCN VCNKMFMNYK
60 70 80 90 100
GLQQHSVIHT DTKPYICDVC GRGFRYKSNM FEHRTVHTGY TPYVCPFCGK
110 120 130 140 150
QFRLKGNMKK HMRTHVTSKE ELEAAYRPYS SNRRSSGIIP SDALVIRGTS
160 170 180 190 200
MPYYNPEKKR SVPKLLLGKD PSKWVDMICR NQLIPLSSFD DKIMRATMRL
210 220 230 240 250
TNCHMASDVL EQAKPLEFEI FRCPICKCEC SGREDCQLHM YASHDKKEAE
260 270 280 290 300
EPNYCTKCMR VFADVDMYRQ HQSYHSRVQL MIRNNELEMG SPEVDISQIC
310
YSMITNTENE MNILKPSA
Length:318
Mass (Da):36,904
Last modified:July 5, 2004 - v2
Checksum:iD9D6C70C59CE9A3D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA Translation: CAB05735.2
PIRiT22512
RefSeqiNP_492621.2, NM_060220.4
UniGeneiCel.18657

Genome annotation databases

EnsemblMetazoaiF52F12.4.1; F52F12.4.1; WBGene00009937
F52F12.4.2; F52F12.4.2; WBGene00009937
GeneIDi172844
KEGGicel:CELE_F52F12.4
UCSCiF52F12.4 c. elegans

Similar proteinsi

Entry informationi

Entry nameiO02273_CAEEL
AccessioniPrimary (citable) accession number: O02273
Entry historyiIntegrated into UniProtKB/TrEMBL: July 1, 1997
Last sequence update: July 5, 2004
Last modified: May 23, 2018
This is version 147 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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