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Protein
Submitted name:

Protein ZFP-3, isoform a

Gene

zfp-3

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
Complete GO annotation...

Keywords - Ligandi

Metal-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Protein ZFP-3, isoform aImported
Gene namesi
Name:zfp-3Imported
ORF Names:CELE_W05H7.4Imported, W05H7.4Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
ProteomesiUP000001940: Chromosome X

Organism-specific databases

WormBaseiW05H7.4a; CE35046; WBGene00021047; zfp-3.

Subcellular locationi

GO - Cellular componenti

  1. nucleus Source: WormBase
Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiO02174.
PRIDEiO02174.

Expressioni

Gene expression databases

ExpressionAtlasiO02174. baseline and differential.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
abl-1P039495EBI-2315779,EBI-2315883
sorb-1O624824EBI-2315779,EBI-325337
T04C9.1Q8MPT26EBI-2315779,EBI-2315635

Protein-protein interaction databases

DIPiDIP-24700N.
IntActiO02174. 7 interactions.

Structurei

3D structure databases

ProteinModelPortaliO02174.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiNOG327004.
HOGENOMiHOG000018505.

Family and domain databases

Gene3Di4.10.1000.10. 1 hit.
InterProiIPR000571. Znf_CCCH.
[Graphical view]
SMARTiSM00356. ZnF_C3H1. 1 hit.
[Graphical view]
PROSITEiPS50103. ZF_C3H1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O02174-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPSSVSYSPS NPGIRIVKRK PKPEAVAAAA AVPTAIYSGK RHATDDGEDA
60 70 80 90 100
GLAALKLKPN RGILRGPAIS NLNQRGTRRL IFADTRGLPL VHVKEIERIA
110 120 130 140 150
AIHSNVADYR CSERNEAAAF GQEMEVFEDV EWSLVPVKRS KPARSEMSES
160 170 180 190 200
GLREERRIEE EGIMRGAMFG MCQLEDNPAL NEQAAVDRAN YTPTIIPTVS
210 220 230 240 250
VPSEPTTLAT IRDLPLPGRP PRVRPQDLLL QVKPNQGFHT LPLYHSQRPE
260 270 280 290 300
NPRRPMYAQQ QQQQSAHQTP TPHIQQVFQE TEPVTNYYTA TTSVPETPEP
310 320 330 340 350
APAAQPASRF ELPSNLKEML NQLKKKGFVS SDETPSPTTS APPPVDPLAA
360 370 380 390 400
AMQTAQQMML QQGNTYASEE VPQDYPMDGY VATFATPEMM AQERRQDSRN
410 420 430 440 450
SEGWTQSGWK IPEPCVYFIS RPGGCNRGDQ CRFIHDEEMR RQKMAELPPR
460 470 480 490 500
GPNHHHDNFR GGRGRGFRGG YNNRNNYNNH HDRDFRDNAG GNRGRFGDTE
510 520 530 540 550
GFRGARYARG GFAPRNNSRF DQKPAYNDDG GHLGSPNAHG SQYQDPVPTK
560 570 580 590 600
RARVSRFDRQ GEDDAPGQDM DQRPPRRNRF DEQPPRRTFR SRFDQQADHD

EMSQA
Length:605
Mass (Da):67,932
Last modified:October 1, 2003 - v2
Checksum:i3B0124F8DFB84BCB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FO080991 Genomic DNA. Translation: CCD68294.1.
PIRiT29508.
RefSeqiNP_741720.2. NM_171628.2.
UniGeneiCel.20064.

Genome annotation databases

EnsemblMetazoaiW05H7.4a; W05H7.4a; WBGene00021047.
GeneIDi180479.
KEGGicel:CELE_W05H7.4.
UCSCiW05H7.4e. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FO080991 Genomic DNA. Translation: CCD68294.1.
PIRiT29508.
RefSeqiNP_741720.2. NM_171628.2.
UniGeneiCel.20064.

3D structure databases

ProteinModelPortaliO02174.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-24700N.
IntActiO02174. 7 interactions.

Proteomic databases

PaxDbiO02174.
PRIDEiO02174.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiW05H7.4a; W05H7.4a; WBGene00021047.
GeneIDi180479.
KEGGicel:CELE_W05H7.4.
UCSCiW05H7.4e. c. elegans.

Organism-specific databases

CTDi180479.
WormBaseiW05H7.4a; CE35046; WBGene00021047; zfp-3.

Phylogenomic databases

eggNOGiNOG327004.
HOGENOMiHOG000018505.

Miscellaneous databases

NextBioi909562.

Gene expression databases

ExpressionAtlasiO02174. baseline and differential.

Family and domain databases

Gene3Di4.10.1000.10. 1 hit.
InterProiIPR000571. Znf_CCCH.
[Graphical view]
SMARTiSM00356. ZnF_C3H1. 1 hit.
[Graphical view]
PROSITEiPS50103. ZF_C3H1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    The C. elegans sequencing consortium
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiO02174_CAEEL
AccessioniPrimary (citable) accession number: O02174
Entry historyi
Integrated into UniProtKB/TrEMBL: July 1, 1997
Last sequence update: October 1, 2003
Last modified: January 7, 2015
This is version 94 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.