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Protein
Submitted name:

Sperm-Specific family, class R

Gene

ssr-2

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

GTP-bindingSAAS annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
Sperm-Specific family, class RImported
Gene namesi
Name:ssr-2Imported
ORF Names:C14A11.7Imported, CELE_C14A11.7Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome X

Organism-specific databases

WormBaseiC14A11.7; CE39675; WBGene00006055; ssr-2.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiO02139.
PRIDEiO02139.

Interactioni

Protein-protein interaction databases

IntActiO02139. 2 interactions.
STRINGi6239.C14A11.7.

Structurei

3D structure databases

ProteinModelPortaliO02139.
SMRiO02139. Positions 4-163.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiKOG0395. Eukaryota.
COG1100. LUCA.
GeneTreeiENSGT00780000121857.
HOGENOMiHOG000016584.
InParanoidiO02139.
OMAiKMRRHGE.
OrthoDBiEOG7J4479.
PhylomeDBiO02139.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR001806. Small_GTPase.
IPR020849. Small_GTPase_Ras.
[Graphical view]
PANTHERiPTHR24070. PTHR24070. 2 hits.
PfamiPF00071. Ras. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00231. small_GTP. 1 hit.
PROSITEiPS51421. RAS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O02139-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MCEERYRLVV LGSAKVGKTN IIRRYLYNEF SSKYKETIED LHSREFRIQG
60 70 80 90 100
VPLPLDILDT NFNFPDMRRL SIASASAFLL VFSVDDVTSF KEMSDIWQEI
110 120 130 140 150
CSRRSDLNEL PIVVVGNKCD VENKKIYEET AKAFTNRLSS DVRYIEVSAK
160 170 180 190 200
DNIRITDVFR TLLELSGFPR CKAGGGRLDD VAEDEETRSS PSIRRSATVR
210 220 230 240 250
AKSTTRRDPR KTLMEDEKNT ASTKNGSQSA REQPQLDKQA SHPVLAVPLH
260 270 280 290 300
IGDLKRNLSL RMKSPRRDKE QVERKLSDEP KISRSSSLIR RTKHLSLKMR
310 320
RHGEKSNHEE IVDESDCKIQ
Length:320
Mass (Da):36,763
Last modified:January 15, 2008 - v3
Checksum:iD9924551FEED38FD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284606 Genomic DNA. Translation: CCD63469.1.
RefSeqiNP_508490.3. NM_076089.4.
UniGeneiCel.23986.

Genome annotation databases

EnsemblMetazoaiC14A11.7; C14A11.7; WBGene00006055.
GeneIDi191965.
KEGGicel:CELE_C14A11.7.
UCSCiC14A11.7. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284606 Genomic DNA. Translation: CCD63469.1.
RefSeqiNP_508490.3. NM_076089.4.
UniGeneiCel.23986.

3D structure databases

ProteinModelPortaliO02139.
SMRiO02139. Positions 4-163.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiO02139. 2 interactions.
STRINGi6239.C14A11.7.

Proteomic databases

PaxDbiO02139.
PRIDEiO02139.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiC14A11.7; C14A11.7; WBGene00006055.
GeneIDi191965.
KEGGicel:CELE_C14A11.7.
UCSCiC14A11.7. c. elegans.

Organism-specific databases

CTDi191965.
WormBaseiC14A11.7; CE39675; WBGene00006055; ssr-2.

Phylogenomic databases

eggNOGiKOG0395. Eukaryota.
COG1100. LUCA.
GeneTreeiENSGT00780000121857.
HOGENOMiHOG000016584.
InParanoidiO02139.
OMAiKMRRHGE.
OrthoDBiEOG7J4479.
PhylomeDBiO02139.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR001806. Small_GTPase.
IPR020849. Small_GTPase_Ras.
[Graphical view]
PANTHERiPTHR24070. PTHR24070. 2 hits.
PfamiPF00071. Ras. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00231. small_GTP. 1 hit.
PROSITEiPS51421. RAS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiO02139_CAEEL
AccessioniPrimary (citable) accession number: O02139
Entry historyi
Integrated into UniProtKB/TrEMBL: July 1, 1997
Last sequence update: January 15, 2008
Last modified: July 6, 2016
This is version 125 of the entry and version 3 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.