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Protein
Submitted name:

Uncharacterized protein

Gene

C18E3.5

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

ReactomeiR-CEL-72163. mRNA Splicing - Major Pathway.
R-CEL-72165. mRNA Splicing - Minor Pathway.
SignaLinkiO02097.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:C18E3.5Imported, CELE_C18E3.5Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome I

Organism-specific databases

WormBaseiC18E3.5; CE27713; WBGene00015974.

PTM / Processingi

Proteomic databases

EPDiO02097.
PaxDbiO02097.
PeptideAtlasiO02097.

Expressioni

Gene expression databases

BgeeiWBGene00015974.

Interactioni

Protein-protein interaction databases

STRINGi6239.C18E3.5.1.

Structurei

3D structure databases

ProteinModelPortaliO02097.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini32 – 331WD_REPEATS_REGIONInterPro annotationAdd BLAST300

Phylogenomic databases

eggNOGiKOG0265. Eukaryota.
ENOG410XSEW. LUCA.
GeneTreeiENSGT00810000125363.
HOGENOMiHOG000091644.
InParanoidiO02097.
OMAiTGIVNSC.
OrthoDBiEOG091G0DR4.
PhylomeDBiO02097.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
InterProiIPR020472. G-protein_beta_WD-40_rep.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF00400. WD40. 6 hits.
[Graphical view]
PRINTSiPR00320. GPROTEINBRPT.
SMARTiSM00320. WD40. 7 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 1 hit.
PROSITEiPS00678. WD_REPEATS_1. 3 hits.
PS50082. WD_REPEATS_2. 7 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O02097-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAMVIPARNQ MASQFLELPK RTSSLMAPTM VLQGHGGEIY TSQFSSDGSF
60 70 80 90 100
LASAGYDQQI FLWNVFGECE NFAVLKGHKG AIMEVKFNAD SSHLVSAGTD
110 120 130 140 150
KTVRVWDMET GSCIRNFKSH TDIVNSVDVN RRGPQMICSA SDDGTVMVHD
160 170 180 190 200
MRSKEAAKKF ICKYQQTAVT FNDAADNVIC GGIDNQIKVW DMLRNDVRYV
210 220 230 240 250
LSGHRDTITS LSVSHNGNFL LSNSMDCSLM SWDIRPFVPA QRLVARYQGA
260 270 280 290 300
SHNFEKNLLK CGWSPRDNYI TAGSADRFVY VWNAKSRACV YKLPGHLGSV
310 320 330
NCTALHPTQQ ILLSAGSDKT IFLGELDLED Y
Length:331
Mass (Da):36,752
Last modified:October 1, 2001 - v2
Checksum:i008981785FD37F0A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA. Translation: CCD65140.1.
RefSeqiNP_491325.1. NM_058924.5.
UniGeneiCel.22443.

Genome annotation databases

EnsemblMetazoaiC18E3.5; C18E3.5; WBGene00015974.
GeneIDi172015.
KEGGicel:CELE_C18E3.5.
UCSCiC18E3.5. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA. Translation: CCD65140.1.
RefSeqiNP_491325.1. NM_058924.5.
UniGeneiCel.22443.

3D structure databases

ProteinModelPortaliO02097.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.C18E3.5.1.

Proteomic databases

EPDiO02097.
PaxDbiO02097.
PeptideAtlasiO02097.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiC18E3.5; C18E3.5; WBGene00015974.
GeneIDi172015.
KEGGicel:CELE_C18E3.5.
UCSCiC18E3.5. c. elegans.

Organism-specific databases

CTDi172015.
WormBaseiC18E3.5; CE27713; WBGene00015974.

Phylogenomic databases

eggNOGiKOG0265. Eukaryota.
ENOG410XSEW. LUCA.
GeneTreeiENSGT00810000125363.
HOGENOMiHOG000091644.
InParanoidiO02097.
OMAiTGIVNSC.
OrthoDBiEOG091G0DR4.
PhylomeDBiO02097.

Enzyme and pathway databases

ReactomeiR-CEL-72163. mRNA Splicing - Major Pathway.
R-CEL-72165. mRNA Splicing - Minor Pathway.
SignaLinkiO02097.

Gene expression databases

BgeeiWBGene00015974.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
InterProiIPR020472. G-protein_beta_WD-40_rep.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF00400. WD40. 6 hits.
[Graphical view]
PRINTSiPR00320. GPROTEINBRPT.
SMARTiSM00320. WD40. 7 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 1 hit.
PROSITEiPS00678. WD_REPEATS_1. 3 hits.
PS50082. WD_REPEATS_2. 7 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO02097_CAEEL
AccessioniPrimary (citable) accession number: O02097
Entry historyi
Integrated into UniProtKB/TrEMBL: July 1, 1997
Last sequence update: October 1, 2001
Last modified: November 2, 2016
This is version 129 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.