Unreviewed, UniProtKB/TrEMBL O01906 (O01906_CAEEL)

Names and origin

Protein names

Submitted name:
    Alpha1,3-fucosyltransferase homologue EMBL CAG32978.1
Submitted name:
    Fucosyl transferase protein 3 EMBL AAB54261.2

Gene names

Name:	fut-3 EMBL AAB54261.2 WormBase WBGene00006402 WormPep F59E12.13
ORF Names:	F59E12.13 EMBL AAB54261.2 WormPep F59E12.13

Organism

Caenorhabditis elegans [Complete proteome]

Taxonomic identifier

6239 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	400 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

General annotation (Comments)

Subcellular location	Golgi apparatus › Golgi stack membrane; Single-pass type II membrane protein By similarity. RuleBase RU003832V0
Sequence similarities	Belongs to the glycosyltransferase 10 family. RuleBase RU003832V0

Ontologies

Keywords
Cellular component	Golgi apparatus RuleBase RU003832V0 Membrane
Domain	Transmembrane RuleBase RU003832V0
Molecular function	Glycosyltransferase RuleBase RU003832V0 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	protein amino acid glycosylation Inferred from electronic annotation. Source: InterPro
Cellular component	membrane Inferred from electronic annotation. Source: InterPro
Molecular function	fucosyltransferase activity Inferred from electronic annotation. Source: InterPro protein binding Inferred from physical interaction. Source: IntAct
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	O01906-1 [UniParc]. Last modified December 1, 2001. Version 2. Checksum: C94BC3C1C101C517	FASTA	400	45,744
	10 20 30 40 50 60 MRVRPASVYR YLLLGVCALL GIYTVYSIIG YDDGSHVPIH RPQRHLYLTV SQDRIGSRFG 70 80 90 100 110 120 KLAPKRILYW TTIFGATVPS TALSDCPGLT DRCVIDTNRH QLDSADAVVF HAADISKFPL 130 140 150 160 170 180 PVSRKPDQIF VFNSMETPDN SGRFAVPDGF FNWTSTHLYS SDAIHKYGTF LIPTQIAESR 190 200 210 220 230 240 GFKVQSYYVQ PKRLVKTMKG IFGLISNCHT KSKRELALQE LGKHINVTIG GKCASDDRLK 250 260 270 280 290 300 SICPAGVECI DVFEQYPFYI AIENTVCNDY VTEKIWSRIT VPSIPIVMRR RVYQNILPPK 310 320 330 340 350 360 SFIAMDDYKN PSEMANHLRS LEANSTAYGE YFEWRQKGLW TSAPWNAPGY RNGLCRVCEL 370 380 390 400 LWKAKDNETE VYKSYDNIWK WFDNESQCET DEFVRSWLSG

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Genome sequence of the nematode C. elegans: a platform for investigating biology." The C. elegans sequencing consortium Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2.
[2]	"Lectin affinity capture, isotope-coded tagging and mass spectrometry to identify N-linked glycoproteins." Kaji H., Saito H., Yamauchi Y., Shinkawa T., Taoka M., Hirabayashi J., Kasai K., Takahashi N., Isobe T. Nat. Biotechnol. 21:667-672(2003) [PubMed: 12754521] [Abstract] Cited for: GLYCOSYLATION AT ASN-152, MASS SPECTROMETRY.
[3]	"Proteomics reveals N-linked glycoprotein diversity in Caenorhabditis elegans and suggests an atypical translocation mechanism for integral membrane proteins." Kaji H., Kamiie J., Kawakami H., Kido K., Yamauchi Y., Shinkawa T., Taoka M., Takahashi N., Isobe T. Mol. Cell. Proteomics 6:2100-2109(2007) [PubMed: 17761667] [Abstract] Cited for: GLYCOSYLATION [LARGE SCALE ANALYSIS], MASS SPECTROMETRY.
[4]	"Molecular basis of anti-horseradish peroxidase staining in Caenorhabditis elegans." Paschinger K., Rendic D., Lochnit G., Jantsch V., Wilson I.B. J. Biol. Chem. 279:49588-49598(2004) [PubMed: 15364955] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[5]	Wilson I.B.H. Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AF003386 Genomic DNA. Translation: AAB54261.2. AJ745072 mRNA. Translation: CAG32978.1.
PIR	T15270.
RefSeq	NP_495106.1.
UniGene	Cel.14904
3D structure databases
ModBase	Search...
Protein-protein interaction databases
DIP	DIP:25988N.
IntAct	O01906. 1 interaction.
Protein family/group databases
CAZy	GT10. Glycosyltransferase Family 10.
Genome annotation databases
Ensembl	F59E12.13. Caenorhabditis elegans. [Contig view]
GeneID	173958.
KEGG	cel:F59E12.13.
Organism-specific databases
WormBase	WBGene00006402. fut-3.
WormPep	F59E12.13. CE29413. [WorfDB]
Phylogenomic databases
OMA	O01906. FHAADIS.
Gene expression databases
ArrayExpress	O01906.
Family and domain databases
InterPro	IPR001503. Glyco_trans_10. [Graphical view]
PANTHER	PTHR11929. Glyco_trans_10. 1 hit.
Pfam	PF00852. Glyco_transf_10. 1 hit. [Graphical view]
ProtoNet	Search...
Other Resources
NextBio	881843.

Entry information

Entry name

O01906_CAEEL

Accession

Primary (citable) accession number: O01906

Entry history

Integrated into UniProtKB/TrEMBL:	July 1, 1997
Last sequence update:	December 1, 2001
Last modified:	May 5, 2009
This is version 68 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)