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Protein

60S ribosomal protein L24

Gene

rpl-24.1

Organism
Caenorhabditis elegans
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-CEL-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-CEL-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-CEL-72689. Formation of a pool of free 40S subunits.
R-CEL-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-CEL-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-CEL-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L24
Gene namesi
ORF Names:D1007.12
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome I

Organism-specific databases

WormBaseiD1007.12; CE09047; WBGene00004436; rpl-24.1.

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001368761 – 15960S ribosomal protein L24Add BLAST159

Proteomic databases

EPDiO01868.
PaxDbiO01868.
PeptideAtlasiO01868.
PRIDEiO01868.

PTM databases

iPTMnetiO01868.

Expressioni

Gene expression databases

BgeeiWBGene00004436.

Interactioni

Protein-protein interaction databases

BioGridi37527. 3 interactors.
IntActiO01868. 4 interactors.
MINTiMINT-115692.
STRINGi6239.D1007.12.2.

Structurei

3D structure databases

ProteinModelPortaliO01868.
SMRiO01868.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG1722. Eukaryota.
COG2075. LUCA.
GeneTreeiENSGT00550000074809.
HOGENOMiHOG000184343.
InParanoidiO01868.
KOiK02896.
OMAiRRHHKKG.
OrthoDBiEOG091G0ZDB.
PhylomeDBiO01868.

Family and domain databases

CDDicd00472. Ribosomal_L24e_L24. 1 hit.
InterProiView protein in InterPro
IPR000988. Ribosomal_L24e-rel.
PANTHERiPTHR10792. PTHR10792. 1 hit.
PfamiView protein in Pfam
PF01246. Ribosomal_L24e. 1 hit.

Sequencei

Sequence statusi: Complete.

O01868-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKVETCVYSG YKIHPGHGKR LVRTDGKVQI FLSGKALKGA KLRRNPRDIR
60 70 80 90 100
WTVLYRIKNK KGTHGQEQVT RKKTKKSVQV VNRAVAGLSL DAILAKRNQT
110 120 130 140 150
EDFRRQQREQ AAKIAKDANK AVRAAKAAAN KEKKASQPKT QQKTAKNVKT

AAPRVGGKR
Length:159
Mass (Da):17,780
Last modified:July 1, 1997 - v1
Checksum:iF9A2C7DE9614425C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FO080863 Genomic DNA. Translation: CCD67324.1.
PIRiT30926.
RefSeqiNP_491399.1. NM_058998.5.
UniGeneiCel.18345.

Genome annotation databases

EnsemblMetazoaiD1007.12.1; D1007.12.1; WBGene00004436.
D1007.12.2; D1007.12.2; WBGene00004436.
GeneIDi172062.
KEGGicel:CELE_D1007.12.
UCSCiD1007.12.1. c. elegans.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiRL24_CAEEL
AccessioniPrimary (citable) accession number: O01868
Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 27, 2004
Last sequence update: July 1, 1997
Last modified: July 5, 2017
This is version 106 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families