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Protein
Submitted name:

YTochrome B

Gene

cytb-5.2

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

HemeUniRule annotationSAAS annotation, Iron, Metal-binding

Enzyme and pathway databases

ReactomeiR-CEL-196836. Vitamin C (ascorbate) metabolism.

Names & Taxonomyi

Protein namesi
Submitted name:
YTochrome BImported
Gene namesi
Name:cytb-5.2Imported
ORF Names:CELE_W02D3.1Imported, W02D3.1Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome I

Organism-specific databases

WormBaseiW02D3.1; CE14418; WBGene00020931; cytb-5.2.

PTM / Processingi

Proteomic databases

EPDiO01816.
PaxDbiO01816.
PeptideAtlasiO01816.

Expressioni

Gene expression databases

BgeeiWBGene00020931.

Interactioni

Protein-protein interaction databases

STRINGi6239.W02D3.1.1.

Structurei

3D structure databases

ProteinModelPortaliO01816.
SMRiO01816.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini4 – 83Cytochrome b5 heme-bindingInterPro annotationAdd BLAST80

Sequence similaritiesi

Belongs to the cytochrome b5 family.UniRule annotationSAAS annotation
Contains 1 cytochrome b5 heme-binding domain.UniRule annotation

Phylogenomic databases

eggNOGiKOG0537. Eukaryota.
COG5274. LUCA.
GeneTreeiENSGT00510000046507.
HOGENOMiHOG000039853.
InParanoidiO01816.
OMAiIMTSPTW.
OrthoDBiEOG091G17G8.
PhylomeDBiO01816.

Family and domain databases

Gene3Di3.10.120.10. 1 hit.
InterProiIPR001199. Cyt_B5-like_heme/steroid-bd.
IPR018506. Cyt_B5_heme-BS.
[Graphical view]
PfamiPF00173. Cyt-b5. 1 hit.
[Graphical view]
PRINTSiPR00363. CYTOCHROMEB5.
SMARTiSM01117. Cyt-b5. 1 hit.
[Graphical view]
SUPFAMiSSF55856. SSF55856. 1 hit.
PROSITEiPS00191. CYTOCHROME_B5_1. 1 hit.
PS50255. CYTOCHROME_B5_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O01816-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSELRVISLD EVSKHNWEDA DQSCWIVISG KVYDVTKFLN EHPGGEEVIT
60 70 80 90 100
QLAGKDATVG FLDVGHSKDA IEMANEYLIG QLPESDVPKV ETAAAKPSKN
110 120 130 140
EKSSSLLNDF TEIMTSPTWT NFLIPTTMGL VIYAVYKCMF N
Length:141
Mass (Da):15,633
Last modified:July 1, 1997 - v1
Checksum:iAD1AFE60BD69F3A5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA. Translation: CCD68984.1.
PIRiT15210.
RefSeqiNP_491931.1. NM_059530.4.
UniGeneiCel.9079.

Genome annotation databases

EnsemblMetazoaiW02D3.1; W02D3.1; WBGene00020931.
GeneIDi172393.
KEGGicel:CELE_W02D3.1.
UCSCiW02D3.1.1. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA. Translation: CCD68984.1.
PIRiT15210.
RefSeqiNP_491931.1. NM_059530.4.
UniGeneiCel.9079.

3D structure databases

ProteinModelPortaliO01816.
SMRiO01816.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.W02D3.1.1.

Proteomic databases

EPDiO01816.
PaxDbiO01816.
PeptideAtlasiO01816.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiW02D3.1; W02D3.1; WBGene00020931.
GeneIDi172393.
KEGGicel:CELE_W02D3.1.
UCSCiW02D3.1.1. c. elegans.

Organism-specific databases

CTDi172393.
WormBaseiW02D3.1; CE14418; WBGene00020931; cytb-5.2.

Phylogenomic databases

eggNOGiKOG0537. Eukaryota.
COG5274. LUCA.
GeneTreeiENSGT00510000046507.
HOGENOMiHOG000039853.
InParanoidiO01816.
OMAiIMTSPTW.
OrthoDBiEOG091G17G8.
PhylomeDBiO01816.

Enzyme and pathway databases

ReactomeiR-CEL-196836. Vitamin C (ascorbate) metabolism.

Gene expression databases

BgeeiWBGene00020931.

Family and domain databases

Gene3Di3.10.120.10. 1 hit.
InterProiIPR001199. Cyt_B5-like_heme/steroid-bd.
IPR018506. Cyt_B5_heme-BS.
[Graphical view]
PfamiPF00173. Cyt-b5. 1 hit.
[Graphical view]
PRINTSiPR00363. CYTOCHROMEB5.
SMARTiSM01117. Cyt-b5. 1 hit.
[Graphical view]
SUPFAMiSSF55856. SSF55856. 1 hit.
PROSITEiPS00191. CYTOCHROME_B5_1. 1 hit.
PS50255. CYTOCHROME_B5_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO01816_CAEEL
AccessioniPrimary (citable) accession number: O01816
Entry historyi
Integrated into UniProtKB/TrEMBL: July 1, 1997
Last sequence update: July 1, 1997
Last modified: November 30, 2016
This is version 120 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.