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Protein
Submitted name:

YTochrome B

Gene

cytb-5.2

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Keywordsi

LigandHemeUniRule annotationSAAS annotation, Iron, Metal-binding

Names & Taxonomyi

Protein namesi
Submitted name:
YTochrome BImported
Gene namesi
Name:cytb-5.2Imported
ORF Names:CELE_W02D3.1Imported, W02D3.1Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome I

Organism-specific databases

WormBaseiW02D3.1 ; CE14418 ; WBGene00020931 ; cytb-5.2

PTM / Processingi

Proteomic databases

EPDiO01816
PaxDbiO01816
PeptideAtlasiO01816

Expressioni

Gene expression databases

BgeeiWBGene00020931

Interactioni

Protein-protein interaction databases

STRINGi6239.W02D3.1.1

Structurei

3D structure databases

ProteinModelPortaliO01816
SMRiO01816
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini4 – 83Cytochrome b5 heme-bindingInterPro annotationAdd BLAST80

Sequence similaritiesi

Belongs to the cytochrome b5 family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG0537 Eukaryota
COG5274 LUCA
GeneTreeiENSGT00510000046507
HOGENOMiHOG000039853
InParanoidiO01816
OMAiWTNFLIP
OrthoDBiEOG091G17G8
PhylomeDBiO01816

Family and domain databases

Gene3Di3.10.120.10, 1 hit
InterProiView protein in InterPro
IPR001199 Cyt_B5-like_heme/steroid-bd
IPR036400 Cyt_B5-like_heme/steroid_sf
IPR018506 Cyt_B5_heme-BS
PfamiView protein in Pfam
PF00173 Cyt-b5, 1 hit
PRINTSiPR00363 CYTOCHROMEB5
SMARTiView protein in SMART
SM01117 Cyt-b5, 1 hit
SUPFAMiSSF55856 SSF55856, 1 hit
PROSITEiView protein in PROSITE
PS00191 CYTOCHROME_B5_1, 1 hit
PS50255 CYTOCHROME_B5_2, 1 hit

Sequencei

Sequence statusi: Complete.

O01816-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSELRVISLD EVSKHNWEDA DQSCWIVISG KVYDVTKFLN EHPGGEEVIT
60 70 80 90 100
QLAGKDATVG FLDVGHSKDA IEMANEYLIG QLPESDVPKV ETAAAKPSKN
110 120 130 140
EKSSSLLNDF TEIMTSPTWT NFLIPTTMGL VIYAVYKCMF N
Length:141
Mass (Da):15,633
Last modified:July 1, 1997 - v1
Checksum:iAD1AFE60BD69F3A5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA Translation: CCD68984.1
PIRiT15210
RefSeqiNP_491931.1, NM_059530.4
UniGeneiCel.9079

Genome annotation databases

EnsemblMetazoaiW02D3.1.1; W02D3.1.1; WBGene00020931
W02D3.1.2; W02D3.1.2; WBGene00020931
GeneIDi172393
KEGGicel:CELE_W02D3.1
UCSCiW02D3.1.1 c. elegans

Similar proteinsi

Entry informationi

Entry nameiO01816_CAEEL
AccessioniPrimary (citable) accession number: O01816
Entry historyiIntegrated into UniProtKB/TrEMBL: July 1, 1997
Last sequence update: July 1, 1997
Last modified: February 28, 2018
This is version 129 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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