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Protein

Fatty acid-binding protein homolog 5

Gene

lbp-5

Organism
Caenorhabditis elegans
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei111Fatty acidBy similarity1

GO - Molecular functioni

  • fatty acid binding Source: WormBase
  • transporter activity Source: InterPro
Complete GO annotation...

Keywords - Biological processi

Transport

Keywords - Ligandi

Lipid-binding

Enzyme and pathway databases

ReactomeiR-CEL-163560. Hormone-sensitive lipase (HSL)-mediated triacylglycerol hydrolysis.
R-CEL-2453902. The canonical retinoid cycle in rods (twilight vision).
R-CEL-5362517. Signaling by Retinoic Acid.
R-CEL-5365859. RA biosynthesis pathway.
R-CEL-6798695. Neutrophil degranulation.
R-CEL-975634. Retinoid metabolism and transport.

Names & Taxonomyi

Protein namesi
Recommended name:
Fatty acid-binding protein homolog 5
Gene namesi
Name:lbp-5
ORF Names:W02D3.7
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome I

Organism-specific databases

WormBaseiW02D3.7; CE14430; WBGene00002257; lbp-5.

Subcellular locationi

GO - Cellular componenti

  • nucleus Source: WormBase
  • perinuclear region of cytoplasm Source: WormBase
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000674231 – 136Fatty acid-binding protein homolog 5Add BLAST136

Proteomic databases

EPDiO01814.
PaxDbiO01814.
PeptideAtlasiO01814.
PRIDEiO01814.

Expressioni

Gene expression databases

BgeeiWBGene00002257.

Interactioni

Protein-protein interaction databases

STRINGi6239.W02D3.7.

Structurei

3D structure databases

ProteinModelPortaliO01814.
SMRiO01814.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni131 – 133Fatty acid bindingBy similarity3

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG4015. Eukaryota.
ENOG4111US8. LUCA.
GeneTreeiENSGT00760000118898.
HOGENOMiHOG000004829.
InParanoidiO01814.
OMAiRQFKSTI.
OrthoDBiEOG091G0QSV.
PhylomeDBiO01814.

Family and domain databases

Gene3Di2.40.128.20. 1 hit.
InterProiIPR012674. Calycin.
IPR011038. Calycin-like.
IPR000463. Fatty_acid-bd.
IPR031259. iLBP.
IPR000566. Lipocln_cytosolic_FA-bd_dom.
[Graphical view]
PANTHERiPTHR11955. PTHR11955. 1 hit.
PfamiPF00061. Lipocalin. 1 hit.
[Graphical view]
PRINTSiPR00178. FATTYACIDBP.
SUPFAMiSSF50814. SSF50814. 1 hit.
PROSITEiPS00214. FABP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O01814-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSAEQFVGRW KLVESENFED YLKEVGVGLL LRKAACAAKP TLEIKVNGNK
60 70 80 90 100
WHVNQLSTFK NTTLEFTLGV EFDETTPDGR QFKSTITIED GKVVHVQKRI
110 120 130
KDSDHDSVIT RWFEGEKLIT TLQSGSVISR RAYIRE
Length:136
Mass (Da):15,533
Last modified:July 1, 1997 - v1
Checksum:i0D0EA9CC81983EEC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FO081084 Genomic DNA. Translation: CCD68990.1.
PIRiT15207.
RefSeqiNP_491928.1. NM_059527.3.
UniGeneiCel.18453.

Genome annotation databases

EnsemblMetazoaiW02D3.7; W02D3.7; WBGene00002257.
GeneIDi191700.
KEGGicel:CELE_W02D3.7.
UCSCiW02D3.7. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FO081084 Genomic DNA. Translation: CCD68990.1.
PIRiT15207.
RefSeqiNP_491928.1. NM_059527.3.
UniGeneiCel.18453.

3D structure databases

ProteinModelPortaliO01814.
SMRiO01814.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.W02D3.7.

Proteomic databases

EPDiO01814.
PaxDbiO01814.
PeptideAtlasiO01814.
PRIDEiO01814.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiW02D3.7; W02D3.7; WBGene00002257.
GeneIDi191700.
KEGGicel:CELE_W02D3.7.
UCSCiW02D3.7. c. elegans.

Organism-specific databases

CTDi191700.
WormBaseiW02D3.7; CE14430; WBGene00002257; lbp-5.

Phylogenomic databases

eggNOGiKOG4015. Eukaryota.
ENOG4111US8. LUCA.
GeneTreeiENSGT00760000118898.
HOGENOMiHOG000004829.
InParanoidiO01814.
OMAiRQFKSTI.
OrthoDBiEOG091G0QSV.
PhylomeDBiO01814.

Enzyme and pathway databases

ReactomeiR-CEL-163560. Hormone-sensitive lipase (HSL)-mediated triacylglycerol hydrolysis.
R-CEL-2453902. The canonical retinoid cycle in rods (twilight vision).
R-CEL-5362517. Signaling by Retinoic Acid.
R-CEL-5365859. RA biosynthesis pathway.
R-CEL-6798695. Neutrophil degranulation.
R-CEL-975634. Retinoid metabolism and transport.

Miscellaneous databases

PROiO01814.

Gene expression databases

BgeeiWBGene00002257.

Family and domain databases

Gene3Di2.40.128.20. 1 hit.
InterProiIPR012674. Calycin.
IPR011038. Calycin-like.
IPR000463. Fatty_acid-bd.
IPR031259. iLBP.
IPR000566. Lipocln_cytosolic_FA-bd_dom.
[Graphical view]
PANTHERiPTHR11955. PTHR11955. 1 hit.
PfamiPF00061. Lipocalin. 1 hit.
[Graphical view]
PRINTSiPR00178. FATTYACIDBP.
SUPFAMiSSF50814. SSF50814. 1 hit.
PROSITEiPS00214. FABP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiFABP5_CAEEL
AccessioniPrimary (citable) accession number: O01814
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 10, 2004
Last sequence update: July 1, 1997
Last modified: November 30, 2016
This is version 103 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.