O01806 (O01806_CAEEL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Protein C44E4.4 EMBL CCD67305.1

Gene names

ORF Names:

C44E4.4 EMBL CCD67305.1 WormBase C44E4.4, CELE_C44E4.4 EMBL CCD67305.1

Organism

Caenorhabditis elegans [Reference proteome] EMBL CCD67305.1

Taxonomic identifier

6239 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Protostomia › Ecdysozoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	396 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	RNA processing Inferred from electronic annotation. Source: InterPro
Cellular_component	nucleus Inferred from electronic annotation. Source: InterPro ribonucleoprotein complex Inferred from electronic annotation. Source: InterPro
Molecular_function	RNA binding Inferred from electronic annotation. Source: InterPro nucleotide binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	O01806 [UniParc]. Last modified July 1, 1997. Version 1. Checksum: A2D828A4AFAA3C34	FASTA	396	43,631
	10 20 30 40 50 60 MGETAAAVHD DADQKIIKQL EYYFGNINLP RDKFLQEKLK EDDGWVPITT MLNFNRLASI 70 80 90 100 110 120 SKDTEKIANA VKNSGSGIIS VSEDNQKIRR NEENPVPENS LEYWQKIKHR TVYMKGFSTD 130 140 150 160 170 180 TQLDDIIQWA NQFGETENVL MRRLKPGDRT FKGSVFITYK TREEAEAAQK AEVKFGETEL 190 200 210 220 230 240 TKMMQDEYWT LKNKETKEAR AANKAAKSAK NTSEAIESEK AQHAVRYEKG LILAVDGLGP 250 260 270 280 290 300 DSTIDSIKTF FKLHGSVGYV AHENGGKTAE IRFNNDSEGA QKAWDNAVAA GTDGKVILQE 310 320 330 340 350 360 AELSARVLDG EEEEKYWTEF NARKNQRQGG GRGGRGGRGG RGGRGGRGGR GGRGGRGDRR 370 380 390 GDKRSANDEG ADGSDEPKAK RTVFAEDGAP AAAAAE

References

[1]	"Genome sequence of the nematode C. elegans: a platform for investigating biology." Caenorhabditis elegans Sequencing Consortium Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2 EMBL CCD67305.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FO080862 Genomic DNA. Translation: CCD67305.1.
PIR	T30953.
RefSeq	NP_491411.1. NM_059010.4.
3D structure databases
ProteinModelPortal	O01806.
SMR	O01806. Positions 13-180.
ModBase	Search...
Protein-protein interaction databases
STRING	6239.C44E4.4. O01806.
Proteomic databases
PaxDb	O01806.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	C44E4.4; C44E4.4; C44E4.4.
GeneID	172070.
KEGG	cel:CELE_C44E4.4.
UCSC	C44E4.4. c. elegans.
Organism-specific databases
CTD	172070.
WormBase	C44E4.4; CE08718; WBGene00016653.
Phylogenomic databases
eggNOG	COG5193.
GeneTree	ENSGT00530000063464.
HOGENOM	HOG000022257.
InParanoid	O01806.
KO	K11090.
OMA	KSANSEI.
Family and domain databases
Gene3D	1.10.10.10. 1 hit. 3.30.70.330. 2 hits.
InterPro	IPR002344. Lupus_La. IPR006630. Lupus_La_RNA-bd. IPR012677. Nucleotide-bd_a/b_plait. IPR014886. RRM_3. IPR000504. RRM_dom. IPR011991. WHTH_DNA-bd_dom. [Graphical view]
Pfam	PF05383. La. 1 hit. PF00076. RRM_1. 1 hit. PF08777. RRM_3. 1 hit. [Graphical view]
PRINTS	PR00302. LUPUSLA.
SMART	SM00715. LA. 1 hit. SM00360. RRM. 1 hit. [Graphical view]
PROSITE	PS50961. HTH_LA. 1 hit. PS50102. RRM. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	873891.

Entry information

Entry name

O01806_CAEEL

Accession

Primary (citable) accession number: O01806

Entry history

Integrated into UniProtKB/TrEMBL:	July 1, 1997
Last sequence update:	July 1, 1997
Last modified:	May 1, 2013
This is version 96 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)