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O01806

- O01806_CAEEL

UniProt

O01806 - O01806_CAEEL

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Protein
Submitted name:

Protein C44E4.4

Gene

C44E4.4

Organism
Caenorhabditis elegans
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. nucleotide binding Source: InterPro
  2. RNA binding Source: InterPro

GO - Biological processi

  1. RNA processing Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Protein C44E4.4Imported
Gene namesi
ORF Names:C44E4.4Imported, CELE_C44E4.4Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
ProteomesiUP000001940: Chromosome I

Organism-specific databases

WormBaseiC44E4.4; CE08718; WBGene00016653.

Subcellular locationi

GO - Cellular componenti

  1. nucleus Source: InterPro
  2. ribonucleoprotein complex Source: InterPro
Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiO01806.
PRIDEiO01806.

Interactioni

Protein-protein interaction databases

STRINGi6239.C44E4.4.

Structurei

3D structure databases

ProteinModelPortaliO01806.
SMRiO01806. Positions 13-180, 232-283.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG5193.
GeneTreeiENSGT00760000119379.
HOGENOMiHOG000022257.
InParanoidiO01806.
KOiK11090.
OMAiDKRSAND.
OrthoDBiEOG7C5M90.
PhylomeDBiO01806.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
3.30.70.330. 2 hits.
InterProiIPR002344. Lupus_La.
IPR006630. Lupus_La_RNA-bd.
IPR012677. Nucleotide-bd_a/b_plait.
IPR014886. RRM_3.
IPR000504. RRM_dom.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF05383. La. 1 hit.
PF00076. RRM_1. 1 hit.
PF08777. RRM_3. 1 hit.
[Graphical view]
PRINTSiPR00302. LUPUSLA.
SMARTiSM00715. LA. 1 hit.
SM00360. RRM. 1 hit.
[Graphical view]
PROSITEiPS50961. HTH_LA. 1 hit.
PS50102. RRM. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O01806-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MGETAAAVHD DADQKIIKQL EYYFGNINLP RDKFLQEKLK EDDGWVPITT
60 70 80 90 100
MLNFNRLASI SKDTEKIANA VKNSGSGIIS VSEDNQKIRR NEENPVPENS
110 120 130 140 150
LEYWQKIKHR TVYMKGFSTD TQLDDIIQWA NQFGETENVL MRRLKPGDRT
160 170 180 190 200
FKGSVFITYK TREEAEAAQK AEVKFGETEL TKMMQDEYWT LKNKETKEAR
210 220 230 240 250
AANKAAKSAK NTSEAIESEK AQHAVRYEKG LILAVDGLGP DSTIDSIKTF
260 270 280 290 300
FKLHGSVGYV AHENGGKTAE IRFNNDSEGA QKAWDNAVAA GTDGKVILQE
310 320 330 340 350
AELSARVLDG EEEEKYWTEF NARKNQRQGG GRGGRGGRGG RGGRGGRGGR
360 370 380 390
GGRGGRGDRR GDKRSANDEG ADGSDEPKAK RTVFAEDGAP AAAAAE
Length:396
Mass (Da):43,631
Last modified:July 1, 1997 - v1
Checksum:iA2D828A4AFAA3C34
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FO080862 Genomic DNA. Translation: CCD67305.1.
PIRiT30953.
RefSeqiNP_491411.1. NM_059010.4.
UniGeneiCel.8098.

Genome annotation databases

EnsemblMetazoaiC44E4.4; C44E4.4; WBGene00016653.
GeneIDi172070.
KEGGicel:CELE_C44E4.4.
UCSCiC44E4.4. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FO080862 Genomic DNA. Translation: CCD67305.1 .
PIRi T30953.
RefSeqi NP_491411.1. NM_059010.4.
UniGenei Cel.8098.

3D structure databases

ProteinModelPortali O01806.
SMRi O01806. Positions 13-180, 232-283.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 6239.C44E4.4.

Proteomic databases

PaxDbi O01806.
PRIDEi O01806.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblMetazoai C44E4.4 ; C44E4.4 ; WBGene00016653 .
GeneIDi 172070.
KEGGi cel:CELE_C44E4.4.
UCSCi C44E4.4. c. elegans.

Organism-specific databases

CTDi 172070.
WormBasei C44E4.4 ; CE08718 ; WBGene00016653 .

Phylogenomic databases

eggNOGi COG5193.
GeneTreei ENSGT00760000119379.
HOGENOMi HOG000022257.
InParanoidi O01806.
KOi K11090.
OMAi DKRSAND.
OrthoDBi EOG7C5M90.
PhylomeDBi O01806.

Miscellaneous databases

NextBioi 873891.
PROi O01806.

Family and domain databases

Gene3Di 1.10.10.10. 1 hit.
3.30.70.330. 2 hits.
InterProi IPR002344. Lupus_La.
IPR006630. Lupus_La_RNA-bd.
IPR012677. Nucleotide-bd_a/b_plait.
IPR014886. RRM_3.
IPR000504. RRM_dom.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view ]
Pfami PF05383. La. 1 hit.
PF00076. RRM_1. 1 hit.
PF08777. RRM_3. 1 hit.
[Graphical view ]
PRINTSi PR00302. LUPUSLA.
SMARTi SM00715. LA. 1 hit.
SM00360. RRM. 1 hit.
[Graphical view ]
PROSITEi PS50961. HTH_LA. 1 hit.
PS50102. RRM. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    The C. elegans sequencing consortium
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiO01806_CAEEL
AccessioniPrimary (citable) accession number: O01806
Entry historyi
Integrated into UniProtKB/TrEMBL: July 1, 1997
Last sequence update: July 1, 1997
Last modified: October 29, 2014
This is version 108 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3