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O01806 (O01806_CAEEL) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 104. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
ORF Names:C44E4.4 EMBL CCD67305.1 WormBase C44E4.4, CELE_C44E4.4 EMBL CCD67305.1
OrganismCaenorhabditis elegans [Reference proteome] EMBL CCD67305.1
Taxonomic identifier6239 [NCBI]
Taxonomic lineageEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis

Protein attributes

Sequence length396 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processRNA processing

Inferred from electronic annotation. Source: InterPro

   Cellular_componentnucleus

Inferred from electronic annotation. Source: InterPro

ribonucleoprotein complex

Inferred from electronic annotation. Source: InterPro

   Molecular_functionRNA binding

Inferred from electronic annotation. Source: InterPro

nucleotide binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
O01806 [UniParc].

Last modified July 1, 1997. Version 1.
Checksum: A2D828A4AFAA3C34

FASTA39643,631
        10         20         30         40         50         60 
MGETAAAVHD DADQKIIKQL EYYFGNINLP RDKFLQEKLK EDDGWVPITT MLNFNRLASI 

        70         80         90        100        110        120 
SKDTEKIANA VKNSGSGIIS VSEDNQKIRR NEENPVPENS LEYWQKIKHR TVYMKGFSTD 

       130        140        150        160        170        180 
TQLDDIIQWA NQFGETENVL MRRLKPGDRT FKGSVFITYK TREEAEAAQK AEVKFGETEL 

       190        200        210        220        230        240 
TKMMQDEYWT LKNKETKEAR AANKAAKSAK NTSEAIESEK AQHAVRYEKG LILAVDGLGP 

       250        260        270        280        290        300 
DSTIDSIKTF FKLHGSVGYV AHENGGKTAE IRFNNDSEGA QKAWDNAVAA GTDGKVILQE 

       310        320        330        340        350        360 
AELSARVLDG EEEEKYWTEF NARKNQRQGG GRGGRGGRGG RGGRGGRGGR GGRGGRGDRR 

       370        380        390 
GDKRSANDEG ADGSDEPKAK RTVFAEDGAP AAAAAE 

« Hide

References

[1]"Genome sequence of the nematode C. elegans: a platform for investigating biology."
The C. elegans sequencing consortium
Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Bristol N2.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FO080862 Genomic DNA. Translation: CCD67305.1.
PIRT30953.
RefSeqNP_491411.1. NM_059010.4.
UniGeneCel.8098.

3D structure databases

ProteinModelPortalO01806.
SMRO01806. Positions 13-180, 224-333.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING6239.C44E4.4.

Proteomic databases

PaxDbO01806.
PRIDEO01806.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaC44E4.4; C44E4.4; C44E4.4.
GeneID172070.
KEGGcel:CELE_C44E4.4.
UCSCC44E4.4. c. elegans.

Organism-specific databases

CTD172070.
WormBaseC44E4.4; CE08718; WBGene00016653.

Phylogenomic databases

eggNOGCOG5193.
HOGENOMHOG000022257.
InParanoidO01806.
KOK11090.
OMADKRSAND.
OrthoDBEOG7C5M90.
PhylomeDBO01806.

Family and domain databases

Gene3D1.10.10.10. 1 hit.
3.30.70.330. 2 hits.
InterProIPR002344. Lupus_La.
IPR006630. Lupus_La_RNA-bd.
IPR012677. Nucleotide-bd_a/b_plait.
IPR014886. RRM_3.
IPR000504. RRM_dom.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamPF05383. La. 1 hit.
PF00076. RRM_1. 1 hit.
PF08777. RRM_3. 1 hit.
[Graphical view]
PRINTSPR00302. LUPUSLA.
SMARTSM00715. LA. 1 hit.
SM00360. RRM. 1 hit.
[Graphical view]
PROSITEPS50961. HTH_LA. 1 hit.
PS50102. RRM. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio873891.
PROO01806.

Entry information

Entry nameO01806_CAEEL
AccessionPrimary (citable) accession number: O01806
Entry history
Integrated into UniProtKB/TrEMBL: July 1, 1997
Last sequence update: July 1, 1997
Last modified: April 16, 2014
This is version 104 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)