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O01806

- O01806_CAEEL

UniProt

O01806 - O01806_CAEEL

Protein
Submitted name:

Protein C44E4.4

Gene

C44E4.4

Organism
Caenorhabditis elegans
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 107 (01 Oct 2014)
      Sequence version 1 (01 Jul 1997)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. nucleotide binding Source: InterPro
    2. RNA binding Source: InterPro

    GO - Biological processi

    1. RNA processing Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Protein C44E4.4Imported
    Gene namesi
    ORF Names:C44E4.4Imported, CELE_C44E4.4Imported
    OrganismiCaenorhabditis elegansImported
    Taxonomic identifieri6239 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
    ProteomesiUP000001940: Chromosome I

    Organism-specific databases

    WormBaseiC44E4.4; CE08718; WBGene00016653.

    Subcellular locationi

    GO - Cellular componenti

    1. nucleus Source: InterPro
    2. ribonucleoprotein complex Source: InterPro

    PTM / Processingi

    Proteomic databases

    PaxDbiO01806.
    PRIDEiO01806.

    Interactioni

    Protein-protein interaction databases

    STRINGi6239.C44E4.4.

    Structurei

    3D structure databases

    ProteinModelPortaliO01806.
    SMRiO01806. Positions 13-180.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG5193.
    GeneTreeiENSGT00750000117664.
    HOGENOMiHOG000022257.
    InParanoidiO01806.
    KOiK11090.
    OMAiDKRSAND.
    OrthoDBiEOG7C5M90.
    PhylomeDBiO01806.

    Family and domain databases

    Gene3Di1.10.10.10. 1 hit.
    3.30.70.330. 2 hits.
    InterProiIPR002344. Lupus_La.
    IPR006630. Lupus_La_RNA-bd.
    IPR012677. Nucleotide-bd_a/b_plait.
    IPR014886. RRM_3.
    IPR000504. RRM_dom.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view]
    PfamiPF05383. La. 1 hit.
    PF00076. RRM_1. 1 hit.
    PF08777. RRM_3. 1 hit.
    [Graphical view]
    PRINTSiPR00302. LUPUSLA.
    SMARTiSM00715. LA. 1 hit.
    SM00360. RRM. 1 hit.
    [Graphical view]
    PROSITEiPS50961. HTH_LA. 1 hit.
    PS50102. RRM. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    O01806-1 [UniParc]FASTAAdd to Basket

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    MGETAAAVHD DADQKIIKQL EYYFGNINLP RDKFLQEKLK EDDGWVPITT    50
    MLNFNRLASI SKDTEKIANA VKNSGSGIIS VSEDNQKIRR NEENPVPENS 100
    LEYWQKIKHR TVYMKGFSTD TQLDDIIQWA NQFGETENVL MRRLKPGDRT 150
    FKGSVFITYK TREEAEAAQK AEVKFGETEL TKMMQDEYWT LKNKETKEAR 200
    AANKAAKSAK NTSEAIESEK AQHAVRYEKG LILAVDGLGP DSTIDSIKTF 250
    FKLHGSVGYV AHENGGKTAE IRFNNDSEGA QKAWDNAVAA GTDGKVILQE 300
    AELSARVLDG EEEEKYWTEF NARKNQRQGG GRGGRGGRGG RGGRGGRGGR 350
    GGRGGRGDRR GDKRSANDEG ADGSDEPKAK RTVFAEDGAP AAAAAE 396
    Length:396
    Mass (Da):43,631
    Last modified:July 1, 1997 - v1
    Checksum:iA2D828A4AFAA3C34
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FO080862 Genomic DNA. Translation: CCD67305.1.
    PIRiT30953.
    RefSeqiNP_491411.1. NM_059010.4.
    UniGeneiCel.8098.

    Genome annotation databases

    EnsemblMetazoaiC44E4.4; C44E4.4; WBGene00016653.
    GeneIDi172070.
    KEGGicel:CELE_C44E4.4.
    UCSCiC44E4.4. c. elegans.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FO080862 Genomic DNA. Translation: CCD67305.1 .
    PIRi T30953.
    RefSeqi NP_491411.1. NM_059010.4.
    UniGenei Cel.8098.

    3D structure databases

    ProteinModelPortali O01806.
    SMRi O01806. Positions 13-180.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 6239.C44E4.4.

    Proteomic databases

    PaxDbi O01806.
    PRIDEi O01806.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblMetazoai C44E4.4 ; C44E4.4 ; WBGene00016653 .
    GeneIDi 172070.
    KEGGi cel:CELE_C44E4.4.
    UCSCi C44E4.4. c. elegans.

    Organism-specific databases

    CTDi 172070.
    WormBasei C44E4.4 ; CE08718 ; WBGene00016653 .

    Phylogenomic databases

    eggNOGi COG5193.
    GeneTreei ENSGT00750000117664.
    HOGENOMi HOG000022257.
    InParanoidi O01806.
    KOi K11090.
    OMAi DKRSAND.
    OrthoDBi EOG7C5M90.
    PhylomeDBi O01806.

    Miscellaneous databases

    NextBioi 873891.
    PROi O01806.

    Family and domain databases

    Gene3Di 1.10.10.10. 1 hit.
    3.30.70.330. 2 hits.
    InterProi IPR002344. Lupus_La.
    IPR006630. Lupus_La_RNA-bd.
    IPR012677. Nucleotide-bd_a/b_plait.
    IPR014886. RRM_3.
    IPR000504. RRM_dom.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view ]
    Pfami PF05383. La. 1 hit.
    PF00076. RRM_1. 1 hit.
    PF08777. RRM_3. 1 hit.
    [Graphical view ]
    PRINTSi PR00302. LUPUSLA.
    SMARTi SM00715. LA. 1 hit.
    SM00360. RRM. 1 hit.
    [Graphical view ]
    PROSITEi PS50961. HTH_LA. 1 hit.
    PS50102. RRM. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
      The C. elegans sequencing consortium
      Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Bristol N2Imported.

    Entry informationi

    Entry nameiO01806_CAEEL
    AccessioniPrimary (citable) accession number: O01806
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 1, 1997
    Last sequence update: July 1, 1997
    Last modified: October 1, 2014
    This is version 107 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3