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Protein
Submitted name:

Uncharacterized protein

Gene

CELE_F53F10.2

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

ReactomeiR-CEL-351143. Agmatine biosynthesis.
R-CEL-351202. Metabolism of polyamines.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:CELE_F53F10.2Imported, F53F10.2Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome I

Organism-specific databases

WormBaseiF53F10.2a; CE10982; WBGene00018764.

PTM / Processingi

Proteomic databases

PaxDbiO01579.
PRIDEiO01579.

Expressioni

Gene expression databases

ExpressionAtlasiO01579. baseline.

Interactioni

Protein-protein interaction databases

DIPiDIP-25621N.
IntActiO01579. 4 interactions.
MINTiMINT-1051921.
STRINGi6239.F53F10.2a.1.

Structurei

3D structure databases

ProteinModelPortaliO01579.
SMRiO01579. Positions 56-415.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini64 – 294231Orn_Arg_deC_NInterPro annotationAdd
BLAST
Domaini299 – 408110Orn_DAP_Arg_deCInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the Orn/Lys/Arg decarboxylase class-II family.UniRule annotation

Phylogenomic databases

eggNOGiKOG0622. Eukaryota.
COG0019. LUCA.
GeneTreeiENSGT00390000011560.
InParanoidiO01579.
OMAiEVPFGCS.
OrthoDBiEOG7XSTJQ.
PhylomeDBiO01579.

Family and domain databases

Gene3Di2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
InterProiIPR009006. Ala_racemase/Decarboxylase_C.
IPR022643. De-COase2_C.
IPR022644. De-COase2_N.
IPR000183. Orn/DAP/Arg_de-COase.
IPR002433. Orn_de-COase.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamiPF02784. Orn_Arg_deC_N. 1 hit.
PF00278. Orn_DAP_Arg_deC. 1 hit.
[Graphical view]
PRINTSiPR01179. ODADCRBXLASE.
PR01182. ORNDCRBXLASE.
SUPFAMiSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.

Sequencei

Sequence statusi: Complete.

O01579-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVRHRLPSST YYTPAGEPEW SREMFGEQSI AVLSGAYRNP IEMARHVAAR
60 70 80 90 100
CGSYQPFFVM DVAAIERRLE ALRVMLPRVR PNYAVACNAD PVLARVLSNN
110 120 130 140 150
IDVNFEVSNT AELELVSMNV EPSRAVFCSQ LMTRKAIKNA VLAGCSTFVV
160 170 180 190 200
ESEKQVTDVM NASPEAEIIL AVCLPYSTGE VPFGCSVDEI EEILDMAHLL
210 220 230 240 250
GANVTGIYLE LGLRATLEDY ITSVHDARSI FETADQKFLT LRRVCFGNLS
260 270 280 290 300
VPTGADGAVN NEFMSFCNSL NNVIDDLFES NIDFSASIGR FLVTNAFTLC
310 320 330 340 350
TNVIGKRAMD AKFITNDDFD DGVGFVYQTN DGVYGSFGCK QMDIKPLCKP
360 370 380 390 400
LDVENDSEEQ LHFGTILGPT LDGTDVAQRL MKSRQLRVGE WLVWEQMGAF
410 420 430 440 450
TIPVDSEHSV PPVYYYSGKE CWQKLIHKDE QRRSPSPSVS DNEDIGSDGE
460 470
GGYASSCEDS EAEMALEPLI EDLNEFF
Length:477
Mass (Da):52,861
Last modified:July 1, 1997 - v1
Checksum:i442DA62CFE71212E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA. Translation: CCD66419.1.
PIRiT25798.
RefSeqiNP_740833.1. NM_170847.5.
UniGeneiCel.38720.

Genome annotation databases

EnsemblMetazoaiF53F10.2a.1; F53F10.2a.1; WBGene00018764.
F53F10.2a.2; F53F10.2a.2; WBGene00018764.
F53F10.2a.3; F53F10.2a.3; WBGene00018764.
GeneIDi171958.
KEGGicel:CELE_F53F10.2.
UCSCiF53F10.2b.2. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA. Translation: CCD66419.1.
PIRiT25798.
RefSeqiNP_740833.1. NM_170847.5.
UniGeneiCel.38720.

3D structure databases

ProteinModelPortaliO01579.
SMRiO01579. Positions 56-415.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-25621N.
IntActiO01579. 4 interactions.
MINTiMINT-1051921.
STRINGi6239.F53F10.2a.1.

Proteomic databases

PaxDbiO01579.
PRIDEiO01579.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiF53F10.2a.1; F53F10.2a.1; WBGene00018764.
F53F10.2a.2; F53F10.2a.2; WBGene00018764.
F53F10.2a.3; F53F10.2a.3; WBGene00018764.
GeneIDi171958.
KEGGicel:CELE_F53F10.2.
UCSCiF53F10.2b.2. c. elegans.

Organism-specific databases

CTDi171958.
WormBaseiF53F10.2a; CE10982; WBGene00018764.

Phylogenomic databases

eggNOGiKOG0622. Eukaryota.
COG0019. LUCA.
GeneTreeiENSGT00390000011560.
InParanoidiO01579.
OMAiEVPFGCS.
OrthoDBiEOG7XSTJQ.
PhylomeDBiO01579.

Enzyme and pathway databases

ReactomeiR-CEL-351143. Agmatine biosynthesis.
R-CEL-351202. Metabolism of polyamines.

Miscellaneous databases

NextBioi873419.

Gene expression databases

ExpressionAtlasiO01579. baseline.

Family and domain databases

Gene3Di2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
InterProiIPR009006. Ala_racemase/Decarboxylase_C.
IPR022643. De-COase2_C.
IPR022644. De-COase2_N.
IPR000183. Orn/DAP/Arg_de-COase.
IPR002433. Orn_de-COase.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamiPF02784. Orn_Arg_deC_N. 1 hit.
PF00278. Orn_DAP_Arg_deC. 1 hit.
[Graphical view]
PRINTSiPR01179. ODADCRBXLASE.
PR01182. ORNDCRBXLASE.
SUPFAMiSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiO01579_CAEEL
AccessioniPrimary (citable) accession number: O01579
Entry historyi
Integrated into UniProtKB/TrEMBL: July 1, 1997
Last sequence update: July 1, 1997
Last modified: May 11, 2016
This is version 106 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.