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Protein

Serpentine receptor class beta-15

Gene

srb-15

Organism
Caenorhabditis elegans
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Serpentine receptor class beta-15
Short name:
Protein srb-15
Gene namesi
Name:srb-15
ORF Names:C48B6.5
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome I

Organism-specific databases

WormBaseiC48B6.5; CE38163; WBGene00016743; srb-15.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei24 – 44HelicalSequence analysisAdd BLAST21
Transmembranei57 – 77HelicalSequence analysisAdd BLAST21
Transmembranei109 – 129HelicalSequence analysisAdd BLAST21
Transmembranei142 – 162HelicalSequence analysisAdd BLAST21
Transmembranei186 – 206HelicalSequence analysisAdd BLAST21
Transmembranei237 – 257HelicalSequence analysisAdd BLAST21
Transmembranei276 – 296HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001045051 – 336Serpentine receptor class beta-15Add BLAST336

Proteomic databases

PaxDbiO01509.

Expressioni

Gene expression databases

BgeeiWBGene00016743.

Structurei

3D structure databases

ProteinModelPortaliO01509.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG410KABS. Eukaryota.
ENOG4110IEV. LUCA.
GeneTreeiENSGT00390000002942.
HOGENOMiHOG000017074.
InParanoidiO01509.
OMAiKTSFHGN.
OrthoDBiEOG091G0F0I.
PhylomeDBiO01509.

Family and domain databases

InterProiIPR002184. 7TM_GPCR_serpentine_rcpt_Srb.
[Graphical view]
PfamiPF02175. 7TM_GPCR_Srb. 1 hit.
[Graphical view]
PRINTSiPR00699. TMPROTEINSRB.

Sequencei

Sequence statusi: Complete.

O01509-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTEISEICET AFKLTYHPIY RGSLFIHLFV SISSIIPLIY FVIFKLPKTS
60 70 80 90 100
FHGNLKFLFS AYFVSVFLFS VDFAIISTTE ILIPLFSKHP CNLLIPDQYL
110 120 130 140 150
KIGNTTVSIF MSLSTFFPIS ITIERFIAMK MARTYEKTRV RLGPILTGCN
160 170 180 190 200
ILLDLLIVFF IYRDEKFDDG SISFVFFPKT LAPKMFTFFW VMFFLNLINF
210 220 230 240 250
TFNSYLLRQS IRLKVSTSSL ATKYQREEVV HSTKFAVFVV FCHVILFGFY
260 270 280 290 300
VIGIMILRYF GSIFIPDPAD LMATRGAFTT MISLYNLVVG SVAVYLNHLI
310 320 330
KTRKSEEITG TVRIQATGAV GAQNYENAIF NIWNSV
Length:336
Mass (Da):38,551
Last modified:April 12, 2005 - v2
Checksum:iDCBCBD6BA21EEC6C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FO080896 Genomic DNA. Translation: CCD67582.1.
PIRiT28922.
RefSeqiNP_491969.2. NM_059568.2.
UniGeneiCel.26120.

Genome annotation databases

EnsemblMetazoaiC48B6.5; C48B6.5; WBGene00016743.
GeneIDi183571.
KEGGicel:CELE_C48B6.5.
UCSCiC48B6.5. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FO080896 Genomic DNA. Translation: CCD67582.1.
PIRiT28922.
RefSeqiNP_491969.2. NM_059568.2.
UniGeneiCel.26120.

3D structure databases

ProteinModelPortaliO01509.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PaxDbiO01509.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiC48B6.5; C48B6.5; WBGene00016743.
GeneIDi183571.
KEGGicel:CELE_C48B6.5.
UCSCiC48B6.5. c. elegans.

Organism-specific databases

CTDi183571.
WormBaseiC48B6.5; CE38163; WBGene00016743; srb-15.

Phylogenomic databases

eggNOGiENOG410KABS. Eukaryota.
ENOG4110IEV. LUCA.
GeneTreeiENSGT00390000002942.
HOGENOMiHOG000017074.
InParanoidiO01509.
OMAiKTSFHGN.
OrthoDBiEOG091G0F0I.
PhylomeDBiO01509.

Miscellaneous databases

PROiO01509.

Gene expression databases

BgeeiWBGene00016743.

Family and domain databases

InterProiIPR002184. 7TM_GPCR_serpentine_rcpt_Srb.
[Graphical view]
PfamiPF02175. 7TM_GPCR_Srb. 1 hit.
[Graphical view]
PRINTSiPR00699. TMPROTEINSRB.
ProtoNetiSearch...

Entry informationi

Entry nameiSRB15_CAEEL
AccessioniPrimary (citable) accession number: O01509
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 25, 2005
Last sequence update: April 12, 2005
Last modified: November 2, 2016
This is version 92 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.