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Protein

60S acidic ribosomal protein P2

Gene

rpa-2

Organism
Caenorhabditis elegans
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Plays an important role in the elongation step of protein synthesis.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-CEL-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-CEL-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-CEL-72689. Formation of a pool of free 40S subunits.
R-CEL-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-CEL-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-CEL-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
60S acidic ribosomal protein P2
Gene namesi
Name:rpa-2
ORF Names:C37A2.7
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome I

Organism-specific databases

WormBaseiC37A2.7; CE30433; WBGene00016493.

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001576491 – 10760S acidic ribosomal protein P2Add BLAST107

Post-translational modificationi

Phosphorylated.By similarity

Keywords - PTMi

Phosphoprotein

Proteomic databases

EPDiO01504.
PaxDbiO01504.
PeptideAtlasiO01504.
PRIDEiO01504.

Expressioni

Gene expression databases

BgeeiWBGene00016493.

Interactioni

Subunit structurei

P1 and P2 exist as dimers at the large ribosomal subunit.By similarity

Protein-protein interaction databases

BioGridi37849. 2 interactors.
DIPiDIP-24496N.
IntActiO01504. 1 interactor.
MINTiMINT-1053889.
STRINGi6239.C37A2.7.1.

Structurei

3D structure databases

ProteinModelPortaliO01504.
SMRiO01504.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG3449. Eukaryota.
COG2058. LUCA.
GeneTreeiENSGT00550000074828.
HOGENOMiHOG000229897.
InParanoidiO01504.
KOiK02943.
OMAiICKAVHI.
OrthoDBiEOG091G14BD.
PhylomeDBiO01504.

Family and domain databases

HAMAPiMF_01478. Ribosomal_L12_arch. 1 hit.
InterProiView protein in InterPro
IPR027534. Ribosomal_L12.

Sequencei

Sequence statusi: Complete.

O01504-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKYLGAYLLA TLGGNASPSA QDVLKVLEAG GLDCDMENAN SVVDALKGKT
60 70 80 90 100
ISEVIAQGKV KLSSVPSGGS APAAAAPSGG AAPKAEEKKK EEPKEESDDD

MGFGLFD
Length:107
Mass (Da):10,813
Last modified:June 1, 2002 - v2
Checksum:i6BC6C991EADC94E5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FO080805 Genomic DNA. Translation: CCD66926.1.
PIRiT30159.
RefSeqiNP_491944.2. NM_059543.5.
UniGeneiCel.20069.

Genome annotation databases

EnsemblMetazoaiC37A2.7; C37A2.7; WBGene00016493.
GeneIDi172401.
KEGGicel:CELE_C37A2.7.
UCSCiM04F3.1.1. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FO080805 Genomic DNA. Translation: CCD66926.1.
PIRiT30159.
RefSeqiNP_491944.2. NM_059543.5.
UniGeneiCel.20069.

3D structure databases

ProteinModelPortaliO01504.
SMRiO01504.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi37849. 2 interactors.
DIPiDIP-24496N.
IntActiO01504. 1 interactor.
MINTiMINT-1053889.
STRINGi6239.C37A2.7.1.

Proteomic databases

EPDiO01504.
PaxDbiO01504.
PeptideAtlasiO01504.
PRIDEiO01504.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiC37A2.7; C37A2.7; WBGene00016493.
GeneIDi172401.
KEGGicel:CELE_C37A2.7.
UCSCiM04F3.1.1. c. elegans.

Organism-specific databases

CTDi172401.
WormBaseiC37A2.7; CE30433; WBGene00016493.

Phylogenomic databases

eggNOGiKOG3449. Eukaryota.
COG2058. LUCA.
GeneTreeiENSGT00550000074828.
HOGENOMiHOG000229897.
InParanoidiO01504.
KOiK02943.
OMAiICKAVHI.
OrthoDBiEOG091G14BD.
PhylomeDBiO01504.

Enzyme and pathway databases

ReactomeiR-CEL-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-CEL-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-CEL-72689. Formation of a pool of free 40S subunits.
R-CEL-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-CEL-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-CEL-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Miscellaneous databases

PROiPR:O01504.

Gene expression databases

BgeeiWBGene00016493.

Family and domain databases

HAMAPiMF_01478. Ribosomal_L12_arch. 1 hit.
InterProiView protein in InterPro
IPR027534. Ribosomal_L12.
ProtoNetiSearch...

Entry informationi

Entry nameiRLA2_CAEEL
AccessioniPrimary (citable) accession number: O01504
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 11, 2004
Last sequence update: June 1, 2002
Last modified: June 7, 2017
This is version 105 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.