Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

RAP homolog (Vertebrate Rap GTPase family)

Gene

rap-3

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

GTP-bindingSAAS annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
RAP homolog (Vertebrate Rap GTPase family)Imported
Gene namesi
Name:rap-3Imported
ORF Names:C08F8.7Imported, CELE_C08F8.7Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome IV

Organism-specific databases

WormBaseiC08F8.7; CE40190; WBGene00004309; rap-3.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

EPDiO01312.
PaxDbiO01312.

Expressioni

Gene expression databases

BgeeiWBGene00004309.

Interactioni

Protein-protein interaction databases

STRINGi6239.C08F8.7.

Structurei

3D structure databases

ProteinModelPortaliO01312.
SMRiO01312. Positions 1-156.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiKOG0395. Eukaryota.
COG1100. LUCA.
GeneTreeiENSGT00780000121857.
HOGENOMiHOG000233973.
InParanoidiO01312.
OMAiVFEECAV.
OrthoDBiEOG091G0IH8.
PhylomeDBiO01312.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR001806. Small_GTPase.
IPR020849. Small_GTPase_Ras.
[Graphical view]
PANTHERiPTHR24070. PTHR24070. 1 hit.
PfamiPF00071. Ras. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00231. small_GTP. 1 hit.
PROSITEiPS51421. RAS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O01312-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKEYKIVVLG NGGVGKSALT LQYVQGIFVH TYDATIEDSY RKLSKVDAEN
60 70 80 90 100
ARLEILDTAG TEQFTGMRET YYRTAQGFVL VFSLAETSTF ENLKQTFTDI
110 120 130 140 150
IAIRGKEVPM ILVGNKSDLA ETRQVDESEA HNFAEKLKIP YFETSARLNQ
160 170 180 190 200
NVSEVFEECA VLIQKSAKPN IERRKWSSES EIGDKKCKNW LRSCCCCLIP

CFAHD
Length:205
Mass (Da):23,200
Last modified:May 16, 2006 - v2
Checksum:i2DFF684DD62BAB55
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284604 Genomic DNA. Translation: CAA97427.2.
PIRiT19101.
RefSeqiNP_502095.2. NM_069694.2.
UniGeneiCel.32683.

Genome annotation databases

EnsemblMetazoaiC08F8.7; C08F8.7; WBGene00004309.
GeneIDi182417.
KEGGicel:CELE_C08F8.7.
UCSCiC08F8.7. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284604 Genomic DNA. Translation: CAA97427.2.
PIRiT19101.
RefSeqiNP_502095.2. NM_069694.2.
UniGeneiCel.32683.

3D structure databases

ProteinModelPortaliO01312.
SMRiO01312. Positions 1-156.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.C08F8.7.

Proteomic databases

EPDiO01312.
PaxDbiO01312.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiC08F8.7; C08F8.7; WBGene00004309.
GeneIDi182417.
KEGGicel:CELE_C08F8.7.
UCSCiC08F8.7. c. elegans.

Organism-specific databases

CTDi182417.
WormBaseiC08F8.7; CE40190; WBGene00004309; rap-3.

Phylogenomic databases

eggNOGiKOG0395. Eukaryota.
COG1100. LUCA.
GeneTreeiENSGT00780000121857.
HOGENOMiHOG000233973.
InParanoidiO01312.
OMAiVFEECAV.
OrthoDBiEOG091G0IH8.
PhylomeDBiO01312.

Gene expression databases

BgeeiWBGene00004309.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR001806. Small_GTPase.
IPR020849. Small_GTPase_Ras.
[Graphical view]
PANTHERiPTHR24070. PTHR24070. 1 hit.
PfamiPF00071. Ras. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00231. small_GTP. 1 hit.
PROSITEiPS51421. RAS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO01312_CAEEL
AccessioniPrimary (citable) accession number: O01312
Entry historyi
Integrated into UniProtKB/TrEMBL: July 1, 1997
Last sequence update: May 16, 2006
Last modified: September 7, 2016
This is version 128 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.