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O00429 (DNM1L_HUMAN) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 98. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (5) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Dynamin-1-like protein

EC=3.6.5.5
Alternative name(s):
Dnm1p/Vps1p-like protein
Short name=DVLP
Dynamin family member proline-rich carboxyl-terminal domain less
Short name=Dymple
Dynamin-like protein
Dynamin-like protein 4
Dynamin-like protein IV
Short name=HdynIV
Dynamin-related protein 1
Gene names
Name:DNM1L
Synonyms:DLP1, DRP1
OrganismHomo sapiens (Human)
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length736 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Functions in mitochondrial and peroxisomal division. Mediates membrane fission through oligomerization into ring-like structures which wrap around the scission site to constict and sever the mitochondrial membrane through a GTP hydrolysis-dependent mechanism. Required for normal brain development. Facilitates developmentally-regulated apoptosis during neural tube development. Required for a normal rate of cytochrome c release and caspase activation during apoptosis. Also required for mitochondrial fission during mitosis. May be involved in vesicle transport. Ref.3 Ref.10 Ref.12 Ref.13 Ref.14 Ref.15 Ref.18 Ref.19 Ref.20 Ref.24 Ref.27 Ref.30 Ref.31 Ref.33 Ref.35 Ref.39

Isoform 1 and isoform 4 inhibit peroxisomal division when overexpressed. Ref.3 Ref.10 Ref.12 Ref.13 Ref.14 Ref.15 Ref.18 Ref.19 Ref.20 Ref.24 Ref.27 Ref.30 Ref.31 Ref.33 Ref.35 Ref.39

Catalytic activity

GTP + H2O = GDP + phosphate. Ref.8

Subunit structure

Homotetramer; dimerizes through the N-terminal GTP-middle region of one molecule binding to the GED domain of another DNM1L molecule. Can self-assemble in multimeric ring-like structures. Interacts with BCL2L1; the interaction stimulates the GTPase activity of DMN1L in synapses and increases the number of axonal mitochondria and the size and number of synaptic vesicle clusters. Interacts with FIS1 By similarity. Interacts with GSK3B and MARCH5. Interacts (via the GTPase and B domains) with UBE2I; the interaction promotes sumoylation of DNM1L, mainly in ite B domain. Interacts with PPP3CA; the interaction dephosphorylates DNM1L and regulates its transition to mitochondria. Interacts witn MID49 and MID51. Ref.2 Ref.4 Ref.11 Ref.12 Ref.15 Ref.16 Ref.17 Ref.20 Ref.24 Ref.27 Ref.30 Ref.37 Ref.38

Subcellular location

Cytoplasmcytosol. Golgi apparatus. Endomembrane system; Peripheral membrane protein. Note: Mainly cytosolic. Translocated to the mitochondrial membrane through interaction with FIS1. Colocalized with MARCH5 at mitochondrial membrane. Localizes to mitochondria at sites of division. Associated with peroxisomal membranes, partly recruited there by PEX11B. May also be associated with endoplasmic reticulum tubules and cytoplasmic vesicles and found to be perinuclear. In some cell types, localizes to the Golgi complex. Ref.1 Ref.3 Ref.8 Ref.9 Ref.10 Ref.12 Ref.13 Ref.14 Ref.15 Ref.21 Ref.27 Ref.35

Tissue specificity

Ubiquitously expressed with highest levels found in skeletal muscles, heart, kidney and brain. Isoform 1 is brain-specific. Isoform 2 and isoform 3 are predominantly expressed in testis and skeletal muscles respectively. Isoform 4 is weakly expressed in brain, heart and kidney. Isoform 5 is dominantly expressed in liver, heart and kidney. Isoform 6 is expressed in neurons. Ref.2 Ref.3 Ref.4 Ref.8 Ref.10

Domain

The GED domain folds back to interact, in cis, with the GTP-binding domain and middle domain, and interacts, in trans, with the GED domains of other DNM1L molecules, and is thus critical for activating GTPase activity and for DNM1L dimerization. Ref.15

Post-translational modification

Phosphorylation/dephosphorylation events on two sites near the GED domain regulate mitochondrial fission. Phosphorylation on Ser-637 inhibits mitochondrial fissin probably through preventing intramolecular interaction. Dephosphorylated on this site by PPP3CA which promotes mitochondrial fission. Phosphorylation on Ser-616 also promotes mitochondrial fission. Ref.19 Ref.20 Ref.22 Ref.23 Ref.24 Ref.25 Ref.26 Ref.27 Ref.28 Ref.32

Sumoylated on various lysine residues within the B domain, probably by MUL1. Sumoylation positively regulates mitochondrial fission. Desumoylated by SENP5 during G2/M transition of mitosis. Appears to be linked to its catalytic activity. Ref.29 Ref.30 Ref.31

S-nitrosylation increases DNM1L dimerization, mitochondrial fission and causes neuronal damage.

Ubiquitination by MARCH5 affects mitochondrial morphology.

Involvement in disease

Note=May be associated with Alzheimer disease through beta-amyloid-induced increased S-nitrosylation of DNM1L, which triggers, directly or indirectly, excessive mitochondrial fission, synaptic loss and neuronal damage. Ref.33

Sequence similarities

Belongs to the dynamin family.

Contains 1 GED domain.

Ontologies

Keywords
   Cellular componentCytoplasm
Golgi apparatus
Membrane
   Coding sequence diversityAlternative splicing
Polymorphism
   LigandGTP-binding
Nucleotide-binding
   Molecular functionHydrolase
   PTMAcetylation
Isopeptide bond
Phosphoprotein
S-nitrosylation
Ubl conjugation
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological processcellular component disassembly involved in apoptosis

Traceable author statement. Source: Reactome

dynamin polymerization involved in mitochondrial fission

Inferred from direct assay Ref.12. Source: UniProtKB

membrane fission involved in mitochondrial fission

Inferred from direct assay Ref.12. Source: UniProtKB

mitochondrial fragmentation involved in apoptosis

Inferred from mutant phenotype. Source: HGNC

mitochondrial membrane organization

Traceable author statement. Source: ProtInc

peroxisome fission

Inferred from direct assay Ref.14. Source: UniProtKB

positive regulation of mitochondrial fission

Traceable author statement. Source: BHF-UCL

   Cellular componentcis-Golgi network

Traceable author statement. Source: ProtInc

cytosol

Traceable author statement. Source: Reactome

endomembrane system

Inferred from electronic annotation. Source: UniProtKB-SubCell

endoplasmic reticulum

Traceable author statement. Source: ProtInc

mitochondrial outer membrane

Traceable author statement. Source: Reactome

   Molecular functionGTP binding

Inferred from electronic annotation. Source: UniProtKB-KW

GTPase activity

Traceable author statement. Source: ProtInc

identical protein binding

Inferred from physical interaction. Source: IntAct

protein binding

Inferred from physical interaction Ref.27Ref.30Ref.38Ref.2. Source: UniProtKB

ubiquitin protein ligase binding

Inferred from physical interaction Ref.16. Source: UniProtKB

Complete GO annotation...

Binary interactions

With

Entry

#Exp.

IntAct

Notes

ESR1P033722EBI-724571,EBI-78473

Alternative products

This entry describes 6 isoforms produced by alternative splicing. [Align] [Select]
Isoform 1 (identifier: O00429-1)

Also known as: HdynIV-WT; DLP1F;

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.
Isoform 4 (identifier: O00429-2)

Also known as: HdynIV-11; DLP1c;

The sequence of this isoform differs from the canonical sequence as follows:
     559-569: Missing.
Isoform 2 (identifier: O00429-3)

Also known as: DLP1a;

The sequence of this isoform differs from the canonical sequence as follows:
     533-558: Missing.
Isoform 3 (identifier: O00429-4)

Also known as: HdynIV-37; DLP1b;

The sequence of this isoform differs from the canonical sequence as follows:
     533-569: Missing.
Isoform 5 (identifier: O00429-5)

Also known as: HdynIV-26;

The sequence of this isoform differs from the canonical sequence as follows:
     544-569: Missing.
Note: No experimental confirmation available.
Isoform 6 (identifier: O00429-6)

The sequence of this isoform differs from the canonical sequence as follows:
     83-83: N → NDPATWKNSRHLSK

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 736736Dynamin-1-like protein
PRO_0000206566

Regions

Domain644 – 73592GED
Nucleotide binding32 – 398GTP By similarity
Nucleotide binding146 – 1505GTP By similarity
Nucleotide binding215 – 2184GTP By similarity
Region1 – 343343GTPase domain
Region344 – 489146Middle domain
Region448 – 685238Interaction with GSK3B
Region502 – 56968B domain

Amino acid modifications

Modified residue11N-acetylmethionine Ref.28
Modified residue2831N6-acetyllysine Ref.34
Modified residue5291Phosphoserine By similarity
Modified residue5481Phosphoserine Ref.26
Modified residue6161Phosphoserine; by CDK1 Ref.22 Ref.23 Ref.25 Ref.26 Ref.27 Ref.28 Ref.32
Modified residue6371Phosphoserine; by CAMK1 and PKA Ref.20 Ref.24 Ref.27
Modified residue6441S-nitrosocysteine Ref.33
Cross-link532Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO) Ref.30
Cross-link535Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO) Ref.30
Cross-link558Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO) Ref.30
Cross-link568Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO) Ref.30
Cross-link594Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO) Probable
Cross-link597Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO) Ref.30
Cross-link606Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO) Probable
Cross-link608Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO) Ref.30

Natural variations

Alternative sequence831N → NDPATWKNSRHLSK in isoform 6.
VSP_039097
Alternative sequence533 – 56937Missing in isoform 3.
VSP_013685
Alternative sequence533 – 55826Missing in isoform 2.
VSP_013686
Alternative sequence544 – 56926Missing in isoform 5.
VSP_013687
Alternative sequence559 – 56911Missing in isoform 4.
VSP_013688
Natural variant711S → T. Ref.2 Ref.3 Ref.4
Corresponds to variant rs1064610 [ dbSNP | Ensembl ].
VAR_022446
Natural variant3951A → D in one newborn; with microcephaly, abnormal brain development, optic atrophy, hypoplasia, persistent lactic acidemia and a mildly elevated plasma concentration of very-long-chain fatty acids. Defects observed in both mitochondrial and peroxisomal fission. Ref.39
VAR_063704
Natural variant4261E → D.
Corresponds to variant rs2389105 [ dbSNP | Ensembl ].
VAR_030489

Experimental info

Mutagenesis381K → A: Loss of GTPase activity. Impairs mitochondrial division and induces changes in peroxisome morphology. No effect on oligomerization. Increase in sumoylation by SUMO3. Ref.3 Ref.12 Ref.13 Ref.15 Ref.30
Mutagenesis381K → E: Overexpression delays protein secretion. Ref.3 Ref.12 Ref.13 Ref.15 Ref.30
Mutagenesis391S → I: Decreased localization to the perinuclear region. Ref.8 Ref.14
Mutagenesis391S → N: Reduces peroxisomal abundance. Ref.8 Ref.14
Mutagenesis411V → F: Temperature-sensitive. Impairs mitochondrial division. Ref.12
Mutagenesis591T → A: Impairs mitochondrial division. Reduces peroxisomal abundance. Ref.12 Ref.14
Mutagenesis2811G → D: Temperature-sensitive. Impairs mitochondrial division. Ref.12
Mutagenesis3001C → A: No effect on S-nitrosylation. Ref.33
Mutagenesis3451C → A: No effect on S-nitrosylation. Ref.33
Mutagenesis3611C → A: No effect on S-nitrosylation. Ref.33
Mutagenesis3671C → A: No effect on S-nitrosylation. Ref.33
Mutagenesis4311C → A: No effect on S-nitrosylation. Ref.33
Mutagenesis4461C → A: No effect on S-nitrosylation. Ref.33
Mutagenesis4701C → A: No effect on S-nitrosylation. Ref.33
Mutagenesis5051C → A: No effect on S-nitrosylation. Ref.33
Mutagenesis5321K → R: Some loss of sumoylation in B domain. Complete loss of sumoylation in B domain; when associated with R-535; R-558 and R-568. Ref.30
Mutagenesis5351K → R: Some loss of sumoylation in B domain. Complete loss of sumoylation in B domain; when associated with R-532; R-558 and R-568. Ref.30
Mutagenesis5581K → R: Some loss of sumoylation in B domain. Complete loss of sumoylation in B domain; when associated with R-532; R-535 and R-568. Ref.30
Mutagenesis5681K → R: Some loss of sumoylation in B domain. Complete loss of sumoylation in B domain; when associated with R-532; R-535 and R-558. Ref.30
Mutagenesis5941K → R: Some loss of sumoylation in the GED domain; Complete loss of sumoylation in the GED domain; when associated with R-597; R-606 and R-608. Ref.30
Mutagenesis5971K → R: Some loss of sumoylation in the GED domain; Complete loss of sumoylation in the GED domain; when associated with R-594; R-606 and R-608. Ref.30
Mutagenesis6061K → R: Some loss of sumoylation in the GED domain; Complete loss of sumoylation in the GED domain; when associated with R-594; R-597 and R-608. Ref.30
Mutagenesis6081K → R: Some loss of sumoylation in the GED domain; Complete loss of sumoylation in the GED domain; when associated with R-594; R-597 and R-606. Ref.30
Mutagenesis6161S → A: Little effect on mitochondrial morphology. Translocated to mitochondria. Ref.27
Mutagenesis6371S → A: Abolishes phosphorylation. Promotes mitochondrial fission and cell vulnerability to apoptotic insults. Mostly mitochondrial. Disrupts, in vitro, binding to FIS1. Ref.20 Ref.24 Ref.27
Mutagenesis6371S → D: Impairs intramolecular, but not intermolecular interactions. Slight reduction in GTPase activity. Inhibits mitochondrial fission. Retained in cytoplasm. Ref.20 Ref.24 Ref.27
Mutagenesis6441C → A: Abolishes S-nitrosylation. Reduced dimerization and no enhancement of GTPase activity. Ref.33
Mutagenesis6791K → A: Diminishes intermolecular interaction between GTP-middle domain and GED domain but no effect on oligomerization. Marked reduction in GTPase activity, in vitro. Decreased mitochondrial division. Ref.15
Sequence conflict2081R → C in AAC35283. Ref.2
Sequence conflict2081R → C in AAD39541. Ref.4

Sequences

Sequence LengthMass (Da)Tools
Isoform 1 (HdynIV-WT) (DLP1F) [UniParc].

Last modified February 6, 2007. Version 2.
Checksum: F9521A376B785B71

FASTA73681,877
        10         20         30         40         50         60 
MEALIPVINK LQDVFNTVGA DIIQLPQIVV VGTQSSGKSS VLESLVGRDL LPRGTGIVTR 

        70         80         90        100        110        120 
RPLILQLVHV SQEDKRKTTG EENGVEAEEW GKFLHTKNKL YTDFDEIRQE IENETERISG 

       130        140        150        160        170        180 
NNKGVSPEPI HLKIFSPNVV NLTLVDLPGM TKVPVGDQPK DIELQIRELI LRFISNPNSI 

       190        200        210        220        230        240 
ILAVTAANTD MATSEALKIS REVDPDGRRT LAVITKLDLM DAGTDAMDVL MGRVIPVKLG 

       250        260        270        280        290        300 
IIGVVNRSQL DINNKKSVTD SIRDEYAFLQ KKYPSLANRN GTKYLARTLN RLLMHHIRDC 

       310        320        330        340        350        360 
LPELKTRINV LAAQYQSLLN SYGEPVDDKS ATLLQLITKF ATEYCNTIEG TAKYIETSEL 

       370        380        390        400        410        420 
CGGARICYIF HETFGRTLES VDPLGGLNTI DILTAIRNAT GPRPALFVPE VSFELLVKRQ 

       430        440        450        460        470        480 
IKRLEEPSLR CVELVHEEMQ RIIQHCSNYS TQELLRFPKL HDAIVEVVTC LLRKRLPVTN 

       490        500        510        520        530        540 
EMVHNLVAIE LAYINTKHPD FADACGLMNN NIEEQRRNRL ARELPSAVSR DKSSKVPSAL 

       550        560        570        580        590        600 
APASQEPSPA ASAEADGKLI QDSRRETKNV ASGGGGVGDG VQEPTTGNWR GMLKTSKAEE 

       610        620        630        640        650        660 
LLAEEKSKPI PIMPASPQKG HAVNLLDVPV PVARKLSARE QRDCEVIERL IKSYFLIVRK 

       670        680        690        700        710        720 
NIQDSVPKAV MHFLVNHVKD TLQSELVGQL YKSSLLDDLL TESEDMAQRR KEAADMLKAL 

       730 
QGASQIIAEI RETHLW 

« Hide

Isoform 4 (HdynIV-11) (DLP1c) [UniParc].

Checksum: 208E830E9F906B7F
Show »

FASTA72580,536
Isoform 2 (DLP1a) [UniParc].

Checksum: 05BC4782DACC1C63
Show »

FASTA71079,442
Isoform 3 (HdynIV-37) (DLP1b) [UniParc].

Checksum: CB252ECCC9871127
Show »

FASTA69978,100
Isoform 5 (HdynIV-26) [UniParc].

Checksum: 0021B07297C5A6CC
Show »

FASTA71079,109
Isoform 6 [UniParc].

Checksum: 64E6658C90A577AA
Show »

FASTA74983,399

References

« Hide 'large scale' references
[1]"Identification and subcellular localization of a novel mammalian dynamin-related protein homologous to yeast Vps1p and Dnm1p."
Shin H.-W., Shinotsuka C., Torii S., Murakami K., Nakayama K.
J. Biochem. 122:525-530(1997) [PubMed: 9348079] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), SUBCELLULAR LOCATION.
Tissue: Hepatoma.
[2]"Human dynamin-like protein interacts with the glycogen synthase kinase 3beta."
Hong Y.-R., Chen C.-H., Cheng D.-S., Howng S.-L., Chow C.-C.
Biochem. Biophys. Res. Commun. 249:697-703(1998) [PubMed: 9731200] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 3), VARIANT THR-71, TISSUE SPECIFICITY, INTERACTION WITH GSK3B.
Tissue: Liver.
[3]"Identification and functional characterization of a novel human protein highly related to the yeast dynamin-like GTPase Vps1p."
Imoto M., Tachibana I., Urrutia R.
J. Cell Sci. 111:1341-1349(1998) [PubMed: 9570752] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), VARIANT THR-71, TISSUE SPECIFICITY, SUBCELLULAR LOCATION, MUTAGENESIS OF LYS-38, FUNCTION.
Tissue: Brain.
[4]"Differential expression of four human dynamin-like protein variants in brain tumors."
Chen C.-H., Howng S.-L., Hwang S.-L., Chou C.-K., Liao C.-H., Hong Y.-R.
DNA Cell Biol. 19:189-194(2000) [PubMed: 10749171] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1; 3; 4 AND 5), VARIANT THR-71, TISSUE SPECIFICITY, INTERACTION WITH GSK3B.
Tissue: Brain.
[5]"Complete sequencing and characterization of 21,243 full-length human cDNAs."
Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. expand/collapse author list , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 3 AND 6).
Tissue: Brain.
[6]"The finished DNA sequence of human chromosome 12."
Scherer S.E., Muzny D.M., Buhay C.J., Chen R., Cree A., Ding Y., Dugan-Rocha S., Gill R., Gunaratne P., Harris R.A., Hawes A.C., Hernandez J., Hodgson A.V., Hume J., Jackson A., Khan Z.M., Kovar-Smith C., Lewis L.R. expand/collapse author list , Lozado R.J., Metzker M.L., Milosavljevic A., Miner G.R., Montgomery K.T., Morgan M.B., Nazareth L.V., Scott G., Sodergren E., Song X.-Z., Steffen D., Lovering R.C., Wheeler D.A., Worley K.C., Yuan Y., Zhang Z., Adams C.Q., Ansari-Lari M.A., Ayele M., Brown M.J., Chen G., Chen Z., Clerc-Blankenburg K.P., Davis C., Delgado O., Dinh H.H., Draper H., Gonzalez-Garay M.L., Havlak P., Jackson L.R., Jacob L.S., Kelly S.H., Li L., Li Z., Liu J., Liu W., Lu J., Maheshwari M., Nguyen B.-V., Okwuonu G.O., Pasternak S., Perez L.M., Plopper F.J.H., Santibanez J., Shen H., Tabor P.E., Verduzco D., Waldron L., Wang Q., Williams G.A., Zhang J., Zhou J., Allen C.C., Amin A.G., Anyalebechi V., Bailey M., Barbaria J.A., Bimage K.E., Bryant N.P., Burch P.E., Burkett C.E., Burrell K.L., Calderon E., Cardenas V., Carter K., Casias K., Cavazos I., Cavazos S.R., Ceasar H., Chacko J., Chan S.N., Chavez D., Christopoulos C., Chu J., Cockrell R., Cox C.D., Dang M., Dathorne S.R., David R., Davis C.M., Davy-Carroll L., Deshazo D.R., Donlin J.E., D'Souza L., Eaves K.A., Egan A., Emery-Cohen A.J., Escotto M., Flagg N., Forbes L.D., Gabisi A.M., Garza M., Hamilton C., Henderson N., Hernandez O., Hines S., Hogues M.E., Huang M., Idlebird D.G., Johnson R., Jolivet A., Jones S., Kagan R., King L.M., Leal B., Lebow H., Lee S., LeVan J.M., Lewis L.C., London P., Lorensuhewa L.M., Loulseged H., Lovett D.A., Lucier A., Lucier R.L., Ma J., Madu R.C., Mapua P., Martindale A.D., Martinez E., Massey E., Mawhiney S., Meador M.G., Mendez S., Mercado C., Mercado I.C., Merritt C.E., Miner Z.L., Minja E., Mitchell T., Mohabbat F., Mohabbat K., Montgomery B., Moore N., Morris S., Munidasa M., Ngo R.N., Nguyen N.B., Nickerson E., Nwaokelemeh O.O., Nwokenkwo S., Obregon M., Oguh M., Oragunye N., Oviedo R.J., Parish B.J., Parker D.N., Parrish J., Parks K.L., Paul H.A., Payton B.A., Perez A., Perrin W., Pickens A., Primus E.L., Pu L.-L., Puazo M., Quiles M.M., Quiroz J.B., Rabata D., Reeves K., Ruiz S.J., Shao H., Sisson I., Sonaike T., Sorelle R.P., Sutton A.E., Svatek A.F., Svetz L.A., Tamerisa K.S., Taylor T.R., Teague B., Thomas N., Thorn R.D., Trejos Z.Y., Trevino B.K., Ukegbu O.N., Urban J.B., Vasquez L.I., Vera V.A., Villasana D.M., Wang L., Ward-Moore S., Warren J.T., Wei X., White F., Williamson A.L., Wleczyk R., Wooden H.S., Wooden S.H., Yen J., Yoon L., Yoon V., Zorrilla S.E., Nelson D., Kucherlapati R., Weinstock G., Gibbs R.A.
Nature 440:346-351(2006) [PubMed: 16541075] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[7]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2), NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 27-736 (ISOFORM 1).
Tissue: Lung.
[8]"Dymple, a novel dynamin-like high molecular weight GTPase lacking a proline-rich carboxyl-terminal domain in mammalian cells."
Kamimoto T., Nagai Y., Onogi H., Muro Y., Wakabayashi T., Hagiwara M.
J. Biol. Chem. 273:1044-1051(1998) [PubMed: 9422767] [Abstract]
Cited for: MUTAGENESIS OF SER-39, TISSUE SPECIFICITY, CATALYTIC ACTIVITY, SUBCELLULAR LOCATION.
[9]"A novel dynamin-like protein associates with cytoplasmic vesicles and tubules of the endoplasmic reticulum in mammalian cells."
Yoon Y., Pitts K.R., Dahan S., McNiven M.A.
J. Cell Biol. 140:779-793(1998) [PubMed: 9472031] [Abstract]
Cited for: SUBCELLULAR LOCATION.
[10]"A human dynamin-related protein controls the distribution of mitochondria."
Smirnova E., Shurland D.-L., Ryazantsev S.N., van der Bliek A.M.
J. Cell Biol. 143:351-358(1998) [PubMed: 9786947] [Abstract]
Cited for: TISSUE SPECIFICITY, SUBCELLULAR LOCATION, FUNCTION.
[11]"Intermolecular and interdomain interactions of a dynamin-related GTP-binding protein, Dnm1p/Vps1p-like protein."
Shin H.-W., Takatsu H., Mukai H., Munekata E., Murakami K., Nakayama K.
J. Biol. Chem. 274:2780-2785(1999) [PubMed: 9915810] [Abstract]
Cited for: OLIGOMERIZATION.
[12]"Dynamin-related protein Drp1 is required for mitochondrial division in mammalian cells."
Smirnova E., Griparic L., Shurland D.-L., van der Bliek A.M.
Mol. Biol. Cell 12:2245-2256(2001) [PubMed: 11514614] [Abstract]
Cited for: FUNCTION, SUBCELLULAR LOCATION, MUTAGENESIS OF LYS-38; VAL-41; THR-59 AND GLY-281, OLIGOMERIZATION.
[13]"Dynamin-like protein 1 is involved in peroxisomal fission."
Koch A., Thiemann M., Grabenbauer M., Yoon Y., McNiven M.A., Schrader M.
J. Biol. Chem. 278:8597-8605(2003) [PubMed: 12499366] [Abstract]
Cited for: MUTAGENESIS OF LYS-38, SUBCELLULAR LOCATION, FUNCTION.
[14]"The dynamin-like GTPase DLP1 is essential for peroxisome division and is recruited to peroxisomes in part by PEX11."
Li X., Gould S.J.
J. Biol. Chem. 278:17012-17020(2003) [PubMed: 12618434] [Abstract]
Cited for: MUTAGENESIS OF SER-39 AND THR-59, FUNCTION, SUBCELLULAR LOCATION.
[15]"Intra- and intermolecular domain interactions of the C-terminal GTPase effector domain of the multimeric dynamin-like GTPase Drp1."
Zhu P.P., Patterson A., Stadler J., Seeburg D.P., Sheng M., Blackstone C.
J. Biol. Chem. 279:35967-35974(2004) [PubMed: 15208300] [Abstract]
Cited for: FUNCTION OF STRUCTURAL DOMAINS, OLIGOMERIZATION, SUBCELLULAR LOCATION, MUTAGENESIS OF LYS-38 AND LYS-679.
[16]"A novel mitochondrial ubiquitin ligase plays a critical role in mitochondrial dynamics."
Yonashiro R., Ishido S., Kyo S., Fukuda T., Goto E., Matsuki Y., Ohmura-Hoshino M., Sada K., Hotta H., Yamamura H., Inatome R., Yanagi S.
EMBO J. 25:3618-3626(2006) [PubMed: 16874301] [Abstract]
Cited for: UBIQUITINATION BY MARCH5, INTERACTION WITH MARCH5.
[17]"MARCH-V is a novel mitofusin 2- and Drp1-binding protein able to change mitochondrial morphology."
Nakamura N., Kimura Y., Tokuda M., Honda S., Hirose S.
EMBO Rep. 7:1019-1022(2006) [PubMed: 16936636] [Abstract]
Cited for: UBIQUITINATION BY MARCH5, INTERACTION WITH MARCH5.
[18]"Inhibiting the mitochondrial fission machinery does not prevent Bax/Bak-dependent apoptosis."
Parone P.A., James D.I., Da Cruz S., Mattenberger Y., Donze O., Barja F., Martinou J.C.
Mol. Cell. Biol. 26:7397-7408(2006) [PubMed: 17015472] [Abstract]
Cited for: FUNCTION.
[19]"Mitotic phosphorylation of dynamin-related GTPase Drp1 participates in mitochondrial fission."
Taguchi N., Ishihara N., Jofuku A., Oka T., Mihara K.
J. Biol. Chem. 282:11521-11529(2007) [PubMed: 17301055] [Abstract]
Cited for: PHOSPHORYLATION, FUNCTION.
[20]"Cyclic AMP-dependent protein kinase phosphorylation of Drp1 regulates its GTPase activity and mitochondrial morphology."
Chang C.R., Blackstone C.
J. Biol. Chem. 282:21583-21587(2007) [PubMed: 17553808] [Abstract]
Cited for: PHOSPHORYLATION AT SER-637, FUNCTION, SUBUNIT, MUTAGENESIS OF SER-637.
[21]"The mitochondrial E3 ubiquitin ligase MARCH5 is required for Drp1 dependent mitochondrial division."
Karbowski M., Neutzner A., Youle R.J.
J. Cell Biol. 178:71-84(2007) [PubMed: 17606867] [Abstract]
Cited for: SUBCELLULAR LOCATION.
[22]"Improved titanium dioxide enrichment of phosphopeptides from HeLa cells and high confident phosphopeptide identification by cross-validation of MS/MS and MS/MS/MS spectra."
Yu L.-R., Zhu Z., Chan K.C., Issaq H.J., Dimitrov D.S., Veenstra T.D.
J. Proteome Res. 6:4150-4162(2007) [PubMed: 17924679] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-616, MASS SPECTROMETRY.
Tissue: Cervix carcinoma.
[23]"Automated phosphoproteome analysis for cultured cancer cells by two-dimensional nanoLC-MS using a calcined titania/C18 biphasic column."
Imami K., Sugiyama N., Kyono Y., Tomita M., Ishihama Y.
Anal. Sci. 24:161-166(2008) [PubMed: 18187866] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-616, MASS SPECTROMETRY.
Tissue: Cervix carcinoma.
[24]"CaM kinase I alpha-induced phosphorylation of Drp1 regulates mitochondrial morphology."
Han X.J., Lu Y.F., Li S.A., Kaitsuka T., Sato Y., Tomizawa K., Nairn A.C., Takei K., Matsui H., Matsushita M.
J. Cell Biol. 182:573-585(2008) [PubMed: 18695047] [Abstract]
Cited for: PHOSPHORYLATION AT SER-637, FUNCTION, INTERACTION WITH FIS1, MUTAGENESIS OF SER-637.
[25]"Phosphoproteome of resting human platelets."
Zahedi R.P., Lewandrowski U., Wiesner J., Wortelkamp S., Moebius J., Schuetz C., Walter U., Gambaryan S., Sickmann A.
J. Proteome Res. 7:526-534(2008) [PubMed: 18088087] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-616, MASS SPECTROMETRY.
Tissue: Platelet.
[26]"A quantitative atlas of mitotic phosphorylation."
Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P.
Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed: 18669648] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-548 AND SER-616, MASS SPECTROMETRY.
Tissue: Cervix carcinoma.
[27]"Dephosphorylation by calcineurin regulates translocation of Drp1 to mitochondria."
Cereghetti G.M., Stangherlin A., Martins de Brito O., Chang C.R., Blackstone C., Bernardi P., Scorrano L.
Proc. Natl. Acad. Sci. U.S.A. 105:15803-15808(2008) [PubMed: 18838687] [Abstract]
Cited for: PHOSPHORYLATION AT SER-616 AND SER-637, INTERACTION WITH PPP3CA, DEPHOSPHORYLATION, FUNCTION, SUBCELLULAR LOCATION, MUTAGENESIS OF SER-616 AND SER-637.
[28]"Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach."
Gauci S., Helbig A.O., Slijper M., Krijgsveld J., Heck A.J., Mohammed S.
Anal. Chem. 81:4493-4501(2009) [PubMed: 19413330] [Abstract]
Cited for: ACETYLATION [LARGE SCALE ANALYSIS] AT MET-1, PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-616, MASS SPECTROMETRY.
Tissue: Embryonic kidney.
[29]"MAPL is a new mitochondrial SUMO E3 ligase that regulates mitochondrial fission."
Braschi E., Zunino R., McBride H.M.
EMBO Rep. 10:748-754(2009) [PubMed: 19407830] [Abstract]
Cited for: SUMOYLATION BY MUL1.
[30]"SUMOylation of the mitochondrial fission protein Drp1 occurs at multiple nonconsensus sites within the B domain and is linked to its activity cycle."
Figueroa-Romero C., Iniguez-Lluhi J.A., Stadler J., Chang C.R., Arnoult D., Keller P.J., Hong Y., Blackstone C., Feldman E.L.
FASEB J. 23:3917-3927(2009) [PubMed: 19638400] [Abstract]
Cited for: SUMOYLATION AT LYS-532; LYS-535; LYS-558; LYS-568; LYS-594; LYS-597; LYS-606 AND LYS-608, INTERACTION WITH UBE2I, FUNCTION, MUTAGENESIS OF LYS-38; LYS-532; LYS-535; LYS-558; LYS-568; LYS-594; LYS-597; LYS-606 AND LYS-608.
[31]"Translocation of SenP5 from the nucleoli to the mitochondria modulates DRP1-dependent fission during mitosis."
Zunino R., Braschi E., Xu L., McBride H.M.
J. Biol. Chem. 284:17783-17795(2009) [PubMed: 19411255] [Abstract]
Cited for: SUMOYLATION, DESUMOYLATION, FUNCTION.
[32]"Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions."
Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K.
Sci. Signal. 2:RA46-RA46(2009) [PubMed: 19690332] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-616, MASS SPECTROMETRY.
Tissue: Leukemic T-cell.
[33]"S-nitrosylation of Drp1 mediates beta-amyloid-related mitochondrial fission and neuronal injury."
Cho D.H., Nakamura T., Fang J., Cieplak P., Godzik A., Gu Z., Lipton S.A.
Science 324:102-105(2009) [PubMed: 19342591] [Abstract]
Cited for: S-NITROSYLATION AT CYS-644, FUNCTION, ASSOCIATION WITH ALZHEIMER DISEASE, MUTAGENESIS OF CYS-300; CYS-345; CYS-361; CYS-367; CYS-431; CYS-446; CYS-470; CYS-505 AND CYS-644.
[34]"Lysine acetylation targets protein complexes and co-regulates major cellular functions."
Choudhary C., Kumar C., Gnad F., Nielsen M.L., Rehman M., Walther T., Olsen J.V., Mann M.
Science 325:834-840(2009) [PubMed: 19608861] [Abstract]
Cited for: ACETYLATION [LARGE SCALE ANALYSIS] AT LYS-283, MASS SPECTROMETRY.
[35]"Dynamin-like protein 1 at the Golgi complex: A novel component of the sorting/targeting machinery en route to the plasma membrane."
Bonekamp N.A., Vormund K., Jacob R., Schrader M.
Exp. Cell Res. 316:3454-3467(2010) [PubMed: 20688057] [Abstract]
Cited for: POSSIBLE FUNCTION, SUBCELLULAR LOCATION.
[36]"Initial characterization of the human central proteome."
Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J.
BMC Syst. Biol. 5:17-17(2011) [PubMed: 21269460] [Abstract]
Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
[37]"MiD49 and MiD51, new components of the mitochondrial fission machinery."
Palmer C.S., Osellame L.D., Laine D., Koutsopoulos O.S., Frazier A.E., Ryan M.T.
EMBO Rep. 12:565-573(2011) [PubMed: 21508961] [Abstract]
Cited for: INTERACTION WITH MID49 AND MID51.
[38]"Human MIEF1 recruits Drp1 to mitochondrial outer membranes and promotes mitochondrial fusion rather than fission."
Zhao J., Liu T., Jin S., Wang X., Qu M., Uhlen P., Tomilin N., Shupliakov O., Lendahl U., Nister M.
EMBO J. 30:2762-2778(2011) [PubMed: 21701560] [Abstract]
Cited for: INTERACTION WITH MID51.
[39]"A lethal defect of mitochondrial and peroxisomal fission."
Waterham H.R., Koster J., van Roermund C.W., Mooyer P.A., Wanders R.J., Leonard J.V.
N. Engl. J. Med. 356:1736-1741(2007) [PubMed: 17460227] [Abstract]
Cited for: VARIANT ASP-395, FUNCTION, CHARACTERIZATION OF VARIANT ASP-395.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AB006965 mRNA. Translation: BAA22193.1.
AF061795 mRNA. Translation: AAC35283.1.
AF000430 mRNA. Translation: AAC23724.1.
AF151685 mRNA. Translation: AAD39541.1.
AK299926 mRNA. Translation: BAG61760.1.
AK291094 mRNA. Translation: BAF83783.1.
AC084824 Genomic DNA. No translation available.
AC087588 Genomic DNA. No translation available.
BC024590 mRNA. Translation: AAH24590.1.
IPIIPI00037283.
IPI00146935.
IPI00473085.
IPI00555883.
IPI00871742.
IPI00942042.
PIRJC5695.
RefSeqNP_005681.2. NM_005690.3.
NP_036192.2. NM_012062.3.
NP_036193.2. NM_012063.2.
UniGeneHs.556296.

3D structure databases

ProteinModelPortalO00429.
SMRO00429. Positions 1-348.
ModBaseSearch...

Protein-protein interaction databases

IntActO00429. 5 interactions.
MINTMINT-1394198.
STRINGO00429.

PTM databases

PhosphoSiteO00429.

Proteomic databases

PRIDEO00429.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENST00000266481; ENSP00000266481; ENSG00000087470.
ENST00000381000; ENSP00000370388; ENSG00000087470.
GeneID10059.
KEGGhsa:10059.
UCSCuc001rld.2. human.
uc001rle.2. human.
uc001rlf.2. human.
uc001rlh.2. human.

Organism-specific databases

CTD10059.
GeneCardsGC12P032732.
H-InvDBHIX0010537.
HGNCHGNC:2973. DNM1L.
HPACAB009952.
MIM603850. gene.
neXtProtNX_O00429.
PharmGKBPA27441.
GenAtlasSearch...

Phylogenomic databases

eggNOGprNOG12366.
GeneTreeENSGT00600000084466.
HOVERGENHBG107833.
OrthoDBEOG4SN1N7.
PhylomeDBO00429.

Enzyme and pathway databases

ReactomeREACT_578. Apoptosis.

Gene expression databases

ArrayExpressO00429.
BgeeO00429.
CleanExHS_DNM1L.
GenevestigatorO00429.
GermOnlineENSG00000087470. Homo sapiens.

Family and domain databases

InterProIPR022812. Dynamin.
IPR000375. Dynamin_central.
IPR001401. Dynamin_GTPase.
IPR019762. Dynamin_GTPase_CS.
IPR003130. GED.
IPR020850. GTPase_effector_domain_GED.
[Graphical view]
KOK01528.
PfamPF01031. Dynamin_M. 1 hit.
PF00350. Dynamin_N. 1 hit.
PF02212. GED. 1 hit.
[Graphical view]
PRINTSPR00195. DYNAMIN.
SMARTSM00053. DYNc. 1 hit.
SM00302. GED. 1 hit.
[Graphical view]
PROSITEPS00410. DYNAMIN. 1 hit.
PS51388. GED. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio38007.
PMAP-CutDBO00429.
SOURCESearch...

Entry information

Entry nameDNM1L_HUMAN
AccessionPrimary (citable) accession number: O00429
Secondary accession number(s): A8K4X9 expand/collapse secondary AC list , B4DSU8, O14541, O60709, Q7L6B3, Q8TBT7, Q9BWM1, Q9Y5J2
Entry history
Integrated into UniProtKB/Swiss-Prot: May 10, 2005
Last sequence update: February 6, 2007
Last modified: January 25, 2012
This is version 98 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Relevant documents

Human chromosome 12

Human chromosome 12: entries, gene names and cross-references to MIM

Human entries with polymorphisms or disease mutations

List of human entries with polymorphisms or disease mutations

Human polymorphisms and disease mutations

Index of human polymorphisms and disease mutations

MIM cross-references

Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot

SIMILARITY comments

Index of protein domains and families