O00168 (PLM_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 101.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Phospholemman Alternative name(s): FXYD domain-containing ion transport regulator 1 | ||||
| Gene names |
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| Organism | Homo sapiens (Human) | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 92 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | May have a functional role in muscle contraction. Induces a hyperpolarization-activated chloride current when exogenously expressed. |
| Subcellular location | |
| Tissue specificity | Highest expression in skeletal muscle and heart. Moderate levels in brain, placenta, lung, liver, pancreas, uterus, bladder, prostate, small intestine and colon with mucosal lining. Very low levels in kidney, colon and small intestine without mucosa, prostate without endothelial lining, spleen, and testis. |
| Post-translational modification | Major plasma membrane substrate for cAMP-dependent protein kinase (PK-A) and protein kinase C (PK-C) in several different tissues By similarity. Phosphorylated in response to insulin and adrenergic stimulation. May be phosphorylated by DMPK. Ref.5 |
| Sequence similarities | Belongs to the FXYD family. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Ion transport Transport |
| Cellular component | Membrane |
| Domain | Signal Transmembrane Transmembrane helix |
| Ligand | Chloride |
| Molecular function | Chloride channel Ionic channel |
| PTM | Phosphoprotein |
| Technical term | 3D-structure Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological process | muscle contraction Traceable author statement. Source: ProtInc |
| Cellular component | chloride channel complex Inferred from electronic annotation. Source: UniProtKB-KW integral to plasma membraneTraceable author statement. Source: ProtInc |
| Molecular function | chloride channel activity Traceable author statement. Source: ProtInc |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | |||||||||||||||||
Molecule processing | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Signal peptide | 1 – 20 | 20 | By similarity | |||||||||||||||||||
| Chain | 21 – 92 | 72 | Phospholemman | PRO_0000010359 | ||||||||||||||||||
Regions | ||||||||||||||||||||||
| Topological domain | 21 – 35 | 15 | Extracellular Potential | |||||||||||||||||||
| Transmembrane | 36 – 56 | 21 | Helical; Potential | |||||||||||||||||||
| Topological domain | 57 – 92 | 36 | Cytoplasmic Potential | |||||||||||||||||||
Amino acid modifications | ||||||||||||||||||||||
| Modified residue | 79 | 1 | Phosphothreonine By similarity | |||||||||||||||||||
| Modified residue | 83 | 1 | Phosphoserine; by PKA and PKC By similarity | |||||||||||||||||||
| Modified residue | 88 | 1 | Phosphoserine; by PKA By similarity | |||||||||||||||||||
Experimental info | ||||||||||||||||||||||
| Sequence conflict | 3 | 1 | S → P in AAC51286. Ref.1 | |||||||||||||||||||
| Sequence conflict | 5 | 1 | G → H in AAC51286. Ref.1 | |||||||||||||||||||
Secondary structure | ||||||||||||||||||||||
Helix Strand Turn | ||||||||||||||||||||||
| Helix | 23 – 26 | 4 | ||||||||||||||||||||
| Helix | 28 – 30 | 3 | ||||||||||||||||||||
| Helix | 34 – 64 | 31 | ||||||||||||||||||||
| Turn | 66 – 68 | 3 | ||||||||||||||||||||
| Beta strand | 69 – 71 | 3 | ||||||||||||||||||||
| Turn | 75 – 77 | 3 | ||||||||||||||||||||
| Helix | 80 – 89 | 10 | ||||||||||||||||||||
Sequences
References
| « Hide 'large scale' references | |
| [1] | "Characterization of the human and rat phospholemman (PLM) cDNAs and localization of the human PLM gene to chromosome 19q13.1." Chen L.-S.K., Lo C.F., Numann R., Cuddy M. Genomics 41:435-443(1997) [PubMed: 9169143] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA]. Tissue: Heart. |
| [2] | "The FXYD gene family of small ion transport regulators or channels: cDNA sequence, protein signature sequence, and expression." Sweadner K.J., Rael E. Genomics 68:41-56(2000) [PubMed: 10950925] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA]. |
| [3] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Brain. |
| [4] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Brain, Lung and Testis. |
| [5] | "Phospholemman is a substrate for myotonic dystrophy protein kinase." Mounsey J.P., John J.E. III, Helmke S.M., Bush E.W., Gilbert J., Roses A.D., Perryman M.B., Jones L.R., Moorman J.R. J. Biol. Chem. 275:23362-23367(2000) [PubMed: 10811636] [Abstract] Cited for: PHOSPHORYLATION BY DMPK. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | U72245 mRNA. Translation: AAC51286.1. AK289811 mRNA. Translation: BAF82500.1. BC032800 mRNA. Translation: AAH32800.1. | ||||||||||||||||||
| IPI | IPI00010442. | ||||||||||||||||||
| RefSeq | NP_005022.2. NM_005031.3. NP_068702.1. NM_021902.2. | ||||||||||||||||||
| UniGene | Hs.442498. | ||||||||||||||||||
3D structure databases | |||||||||||||||||||
| PDBe RCSB PDB PDBj |
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| ProteinModelPortal | O00168. | ||||||||||||||||||
| SMR | O00168. Positions 21-92. | ||||||||||||||||||
| ModBase | Search... | ||||||||||||||||||
Protein-protein interaction databases | |||||||||||||||||||
| STRING | O00168. | ||||||||||||||||||
PTM databases | |||||||||||||||||||
| PhosphoSite | O00168. | ||||||||||||||||||
Proteomic databases | |||||||||||||||||||
| PeptideAtlas | O00168. | ||||||||||||||||||
| PRIDE | O00168. | ||||||||||||||||||
Protocols and materials databases | |||||||||||||||||||
| StructuralBiologyKnowledgebase | Search... | ||||||||||||||||||
Genome annotation databases | |||||||||||||||||||
| Ensembl | ENST00000351325; ENSP00000343314; ENSG00000221857. ENST00000455515; ENSP00000393611; ENSG00000221857. | ||||||||||||||||||
| GeneID | 5348. | ||||||||||||||||||
| KEGG | hsa:5348. | ||||||||||||||||||
| UCSC | uc002nyc.1. human. | ||||||||||||||||||
Organism-specific databases | |||||||||||||||||||
| CTD | 5348. | ||||||||||||||||||
| GeneCards | GC19P035629. | ||||||||||||||||||
| H-InvDB | HIX0202855. | ||||||||||||||||||
| HGNC | HGNC:4025. FXYD1. | ||||||||||||||||||
| HPA | HPA026873. | ||||||||||||||||||
| MIM | 602359. gene. | ||||||||||||||||||
| neXtProt | NX_O00168. | ||||||||||||||||||
| PharmGKB | PA28441. | ||||||||||||||||||
| GenAtlas | Search... | ||||||||||||||||||
Phylogenomic databases | |||||||||||||||||||
| eggNOG | prNOG20479. | ||||||||||||||||||
| GeneTree | ENSGT00530000063932. | ||||||||||||||||||
| HOGENOM | HBG444253. | ||||||||||||||||||
| HOVERGEN | HBG008212. | ||||||||||||||||||
| InParanoid | O00168. | ||||||||||||||||||
| OMA | RKCRCKF. | ||||||||||||||||||
| OrthoDB | EOG4PG62F. | ||||||||||||||||||
| PhylomeDB | O00168. | ||||||||||||||||||
Gene expression databases | |||||||||||||||||||
| ArrayExpress | O00168. | ||||||||||||||||||
| Bgee | O00168. | ||||||||||||||||||
| CleanEx | HS_FXYD1. | ||||||||||||||||||
| Genevestigator | O00168. | ||||||||||||||||||
| GermOnline | ENSG00000126258. Homo sapiens. | ||||||||||||||||||
Family and domain databases | |||||||||||||||||||
| InterPro | IPR000272. Ion-transport_regulator_FXYD. [Graphical view] | ||||||||||||||||||
| KO | K13360. | ||||||||||||||||||
| Pfam | PF02038. ATP1G1_PLM_MAT8. 1 hit. [Graphical view] | ||||||||||||||||||
| ProDom | PD005989. PD005989. 1 hit. [Graphical view] [Entries sharing at least one domain] | ||||||||||||||||||
| PROSITE | PS01310. FXYD. 1 hit. [Graphical view] | ||||||||||||||||||
| ProtoNet | Search... | ||||||||||||||||||
Other | |||||||||||||||||||
| NextBio | 20726. | ||||||||||||||||||
| SOURCE | Search... | ||||||||||||||||||
Entry information
| Entry name | PLM_HUMAN | ||||||||
| Accession | Primary (citable) accession number: O00168 Secondary accession number(s): A8K196 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 19 Human chromosome 19: entries, gene names and cross-references to MIM |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| SIMILARITY comments Index of protein domains and families |

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