Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

M9U2I4 (M9U2I4_9ACTO) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 7. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
EC=6.5.1.1 EMBL AGJ57280.1
Gene names
Name:ligD EMBL AGJ57280.1
ORF Names:F750_4841 EMBL AGJ57280.1
OrganismStreptomyces sp. PAMC26508 [Complete proteome] EMBL AGJ57280.1
Taxonomic identifier1265601 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomyces

Protein attributes

Sequence length297 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AGJ57280.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA ligation

Inferred from electronic annotation. Source: GOC

   Molecular_functionDNA ligase (ATP) activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
M9U2I4 [UniParc].

Last modified June 26, 2013. Version 1.
Checksum: D60EA81190E289AD

FASTA29731,959
        10         20         30         40         50         60 
MTPITEVEGR RLTLSNLDKV LYPATGTTKG EVLHYYAATA ARVMLPHLRD RPLSFLRYPD 

        70         80         90        100        110        120 
GPEGLRFFTK NPPPGTPDWV RTAPVPRSDD PGARQVLAQD LPSLMWAANL VVEFHTHQWR 

       130        140        150        160        170        180 
QDSPAVADRM VFDLDPGPPA GVVECCAVAL WLRERLAGDG LSAYGKTSGS KGLHLLVPLE 

       190        200        210        220        230        240 
PTPSGKVTAY AKKLAVEAQG ALPELAVHRM TRALRPGKVF VDFSQNAAAK TTAAPYTLRA 

       250        260        270        280        290 
KARPTVSAPV TWEEIEECGA PDDLVLLAGD MAARLERHGD LLAPLNDPGQ AGALPGG 

« Hide

References

[1]"Genome sequence of Streptomyces sp. PAMC26508, isolated from Antarctic lichen Cladonia borealis."
Shin S.C., Park H.
Submitted (DEC-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: PAMC26508 EMBL AGJ57280.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003990 Genomic DNA. Translation: AGJ57280.1.
RefSeqYP_007861764.1. NC_021055.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGJ57280; AGJ57280; F750_4841.
GeneID15290511.
KEGGstrp:F750_4841.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Family and domain databases

InterProIPR014145. LigD_pol.
[Graphical view]
TIGRFAMsTIGR02778. ligD_pol. 1 hit.
ProtoNetSearch...

Entry information

Entry nameM9U2I4_9ACTO
AccessionPrimary (citable) accession number: M9U2I4
Entry history
Integrated into UniProtKB/TrEMBL: June 26, 2013
Last sequence update: June 26, 2013
Last modified: February 19, 2014
This is version 7 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)