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M9SRD3 (M9SRD3_9ACTO) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 8. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length566 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units. RuleBase RU361134

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Sequences

Sequence LengthMass (Da)Tools
M9SRD3 [UniParc].

Last modified June 26, 2013. Version 1.
Checksum: 1689A59E0B7D7FFD

FASTA56659,680
        10         20         30         40         50         60 
MARRLATASL AVLAAAATAL TAPTPAAAAP PGAKDVTAVL FEWKFASVAR ACTDSLGPAG 

        70         80         90        100        110        120 
YGYVQVSPPQ EHIQGSQWWT SYQPVSYKIA GRLGDRAAFK SMVDTCHAAG VKVVADSVIN 

       130        140        150        160        170        180 
HMAAGSGTGT GGSAYQKYDY PGIWSGADMD DCRSEINDYG NRANVQNCEL VGLADLDTGE 

       190        200        210        220        230        240 
PYVRDRIAAY LNDLLSLGVD GFRIDAAKHM PAADLTAIKA KVGNGSTYWK QEAIHGAGEA 

       250        260        270        280        290        300 
VQPSEYLGTG DVQEFRYARD LKRVFQNENL AHLKNFGEDW GYMASGKSAV FVDNHDTERG 

       310        320        330        340        350        360 
GDTLNYKNGS AYTLAGVFML AWPYGSPDVH SGYEFTDHDA GPPNGGTVNA CYSDGWKCQH 

       370        380        390        400        410        420 
AWPELSSMVG LRNTASGQPV TNWWDNGGDQ IAFGRGDKAY VAINHEGSAL NRTFQSGLPG 

       430        440        450        460        470        480 
GAYCDVQSGR SVTVGSDGTF TATVAAGTAL ALHTGARTCS GGGTGPGTGQ TSASFHVNAT 

       490        500        510        520        530        540 
TAWGENIYVT GDQAALGNWD PARALKLDPA AYPVWKLDVP LAAGTPFQYK YLRKDAAGKA 

       550        560 
VWESGANRTA TVGTTGALTL NDTWRG 

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References

[1]"Insights into naturally minimised Streptomyces albus J1074 genome."
Zaburannyi N., Rabyk M., Ostash B., Fedorenko V., Luzhetskyy A.
BMC Genomics 15:97-97(2014) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: J1074 EMBL AGI90971.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP004370 Genomic DNA. Translation: AGI90971.1.
RefSeqYP_007747974.1. NC_020990.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGI90971; AGI90971; XNR_4649.
GeneID15148473.
KEGGsalb:XNR_4649.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.

Family and domain databases

Gene3D2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR013784. Carb-bd-like_fold.
IPR002044. CBM_fam20.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF00686. CBM_20. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
SM01065. CBM_2. 1 hit.
[Graphical view]
SUPFAMSSF49452. SSF49452. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEPS51166. CBM20. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameM9SRD3_9ACTO
AccessionPrimary (citable) accession number: M9SRD3
Entry history
Integrated into UniProtKB/TrEMBL: June 26, 2013
Last sequence update: June 26, 2013
Last modified: July 9, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)