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Protein
Submitted name:

ATP-dependent rna helicase sub2

Gene

RHTO_02446

Organism
Rhodosporidium toruloides (strain NP11) (Yeast) (Rhodotorula gracilis)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionHelicaseImported, Hydrolase
LigandATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent rna helicase sub2Imported
Gene namesi
ORF Names:RHTO_02446Imported
OrganismiRhodosporidium toruloides (strain NP11) (Yeast) (Rhodotorula gracilis)Imported
Taxonomic identifieri1130832 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaBasidiomycotaPucciniomycotinaMicrobotryomycetesSporidiobolalesSporidiobolaceaeRhodotorula
Proteomesi
  • UP000016926 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini58 – 86Q_MOTIFInterPro annotationAdd BLAST29
Domaini89 – 264Helicase ATP-bindingInterPro annotationAdd BLAST176
Domaini292 – 437Helicase C-terminalInterPro annotationAdd BLAST146

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi58 – 86Q motifPROSITE-ProRule annotationAdd BLAST29

Phylogenomic databases

OrthoDBiEOG092C2V3O.

Family and domain databases

CDDicd00079. HELICc. 1 hit.
InterProiView protein in InterPro
IPR011545. DEAD/DEAH_box_helicase_dom.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
IPR014014. RNA_helicase_DEAD_Q_motif.
PfamiView protein in Pfam
PF00270. DEAD. 1 hit.
PF00271. Helicase_C. 1 hit.
SMARTiView protein in SMART
SM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
SUPFAMiSSF52540. SSF52540. 1 hit.
PROSITEiView protein in PROSITE
PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
PS51195. Q_MOTIF. 1 hit.

Sequencei

Sequence statusi: Complete.

M7WSH7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASTLPTEDL IDYEEDVIEP SVAAPAAAAG GANGDDAAAG AGADDKQGKG
60 70 80 90 100
SYVGVHSTGF RDFLLKPELL RAISDLGFEH PSEVQQECIP QAILGMDVLC
110 120 130 140 150
QAKSGMGKTA VFVTATLQQI EPVDGEVSVI VLCHTRELAF QIKNEYARFS
160 170 180 190 200
KYMPDVRTGV FYGGTSVKVD QDLLKNKEKC PHIVVGTPGR LNALVRDKSL
210 220 230 240 250
KAGSVRHFVL DECDKMLESL DMRRDIQEIF KATPHHKQVM MFSATLAKEI
260 270 280 290 300
RATCKKFMQT PLEIYVDDEK KLTLHGLQQH FVRLEESAKN RKLNDLLDSL
310 320 330 340 350
EFNQVCIFVK SVSRAIELDR LLRECNFPSI AIHSGLNQEE RIRRYQQFKA
360 370 380 390 400
FEKRVLVATD IFGRGIDVER VNIVINYDTP TDADSYLHRV GRAGRFGTKG
410 420 430 440
LAITFVANDE NEEVLKSIQS RFEVAITELP ETIEPSTYMN A
Length:441
Mass (Da):49,160
Last modified:May 29, 2013 - v1
Checksum:i5E29C650730ACACD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KB722659 Genomic DNA. Translation: EMS20830.1.
RefSeqiXP_016271949.1. XM_016416121.1.

Genome annotation databases

EnsemblFungiiEMS20830; EMS20830; RHTO_02446.
GeneIDi27366459.

Similar proteinsi

Entry informationi

Entry nameiM7WSH7_RHOT1
AccessioniPrimary (citable) accession number: M7WSH7
Entry historyiIntegrated into UniProtKB/TrEMBL: May 29, 2013
Last sequence update: May 29, 2013
Last modified: October 25, 2017
This is version 25 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported