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Protein
Submitted name:

Putative trehalose synthase

Gene

CMN_01694

Organism
Clavibacter michiganensis subsp. nebraskensis NCPPB 2581
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative trehalose synthaseImported
Gene namesi
ORF Names:CMN_01694Imported
OrganismiClavibacter michiganensis subsp. nebraskensis NCPPB 2581Imported
Taxonomic identifieri1097677 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeMicrobacteriaceaeClavibacter
ProteomesiUP000012170: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK05343.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR012810. TreS/a-amylase_N.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
TIGRFAMsiTIGR02456. treS_nterm. 1 hit.

Sequencei

Sequence statusi: Complete.

M5B974-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSFTAPITLP GLTLDKQWYK RSVFYEVMIR SFVDSNGDGT GDIQGLISKL
60 70 80 90 100
DYLQWLGIDG LWLPPFFQSP LRDGGYDISD YMAVLPEFGT LDDFKELVTK
110 120 130 140 150
SHERNMRIVI DLVMNHTSDQ HEWFQQSRSD PDGPYGDFYV WSDTDEKYED
160 170 180 190 200
IRVIFVDTEE SNWTFDPVRR QFFFHRFFSH QPDLNFDNPK VHEAIYGVIR
210 220 230 240 250
HWLDMGVDGL RLDAIPYLYE TEEGNGEGEP ATHEFLKRLR AMVDEEYPGR
260 270 280 290 300
ILIAEANQWP REVSAFLGTE EEPECHMAFD FPIMPRIFYS LRSQTADELK
310 320 330 340 350
RIMGETFEIP EAAAWGVFLR NHDELTLEMV SEEYRQAMYG WYAYDPRMRV
360 370 380 390 400
NIGIRRRLAP LLDNSRAELE LVHALLFSLP GSPFLYYGDE IGMGDNIWLP
410 420 430 440 450
DRDASRTPMQ WTPDRNAGFS TADPGKLYLP VVQSLVYNYA QINVESQLAQ
460 470 480 490 500
SRSLLHWVRN VIHVRKAHPV FGQGTIRVLP TDHESVLAFV RSYEGSGTHF
510 520 530 540 550
GDRAEDVLCV FSFAHNPVSV TIDASDFAGS QLYDLFGGGV FPTVGDDGRL
560 570
TLTLATQSFY WLHMGAPAIG GRP
Length:573
Mass (Da):65,723
Last modified:May 29, 2013 - v1
Checksum:i0E976907176AB518
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE614873 Genomic DNA. Translation: CCE75639.1.
RefSeqiWP_015490386.1. NC_020891.1.
YP_007685967.1. NC_020891.1.

Genome annotation databases

EnsemblBacteriaiCCE75639; CCE75639; CMN_01694.
GeneIDi15075196.
KEGGicmc:CMN_01694.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE614873 Genomic DNA. Translation: CCE75639.1.
RefSeqiWP_015490386.1. NC_020891.1.
YP_007685967.1. NC_020891.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCCE75639; CCE75639; CMN_01694.
GeneIDi15075196.
KEGGicmc:CMN_01694.

Phylogenomic databases

KOiK05343.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR012810. TreS/a-amylase_N.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
TIGRFAMsiTIGR02456. treS_nterm. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Gartemann K.
    Submitted (NOV-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Type strain: NCPPB 2581Imported.
  2. "The genome sequence of the maize-pathogen Clavibacter michiganensis subsp. nebraskensis."
    Gartemann K.H., Blom J., Dreiseikelmann B., Fluegel M., Jaenicke S., Linke B., Sczcepanowski R., Wittmann J., Goesmann A., Puehler A., Eichenlaub R., Rueckert C.
    Submitted (APR-2013) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Type strain: NCPPB 2581Imported.

Entry informationi

Entry nameiM5B974_9MICO
AccessioniPrimary (citable) accession number: M5B974
Entry historyi
Integrated into UniProtKB/TrEMBL: May 29, 2013
Last sequence update: May 29, 2013
Last modified: February 4, 2015
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.