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M5B7B2

- M5B7B2_9MICO

UniProt

M5B7B2 - M5B7B2_9MICO

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Protein

Xylose isomerase

Gene
xylA, CMN_00844
Organism
Clavibacter michiganensis subsp. nebraskensis NCPPB 2581
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

D-xylopyranose = D-xylulose.UniRule annotationSAAS annotations

Cofactori

Binds 2 magnesium ions per subunit By similarity.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei54 – 541 By similarityUniRule annotation
Active sitei57 – 571 By similarityUniRule annotation
Metal bindingi181 – 1811Magnesium 1 By similarityUniRule annotation
Metal bindingi217 – 2171Magnesium 1 By similarityUniRule annotation
Metal bindingi217 – 2171Magnesium 2 By similarityUniRule annotation
Metal bindingi220 – 2201Magnesium 2 By similarityUniRule annotation
Metal bindingi245 – 2451Magnesium 1 By similarityUniRule annotation
Metal bindingi255 – 2551Magnesium 2 By similarityUniRule annotation
Metal bindingi257 – 2571Magnesium 2 By similarityUniRule annotation
Metal bindingi293 – 2931Magnesium 1 By similarityUniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. xylose isomerase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. D-xylose metabolic process Source: UniProtKB-HAMAP
  2. pentose-phosphate shunt Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotationsImported

Keywords - Biological processi

Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotations, Xylose metabolismUniRule annotationSAAS annotations

Keywords - Ligandi

MagnesiumUniRule annotation, Metal-bindingUniRule annotationSAAS annotations

Names & Taxonomyi

Protein namesi
Recommended name:
Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
Gene namesi
Name:xylAUniRule annotationImported
ORF Names:CMN_00844Imported
OrganismiClavibacter michiganensis subsp. nebraskensis NCPPB 2581Imported
Taxonomic identifieri1097677 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeMicrobacteriaceaeClavibacter
ProteomesiUP000012170: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotation

Interactioni

Subunit structurei

Homotetramer By similarity.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the xylose isomerase family.UniRule annotation

Phylogenomic databases

KOiK01805.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
HAMAPiMF_00455. Xylose_isom_A.
InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013453. XylA_actinobac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamiPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSiPR00688. XYLOSISMRASE.
SUPFAMiSSF51658. SSF51658. 1 hit.
TIGRFAMsiTIGR02631. xylA_Arthro. 1 hit.
PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

M5B7B2-1 [UniParc]FASTAAdd to Basket

« Hide

MALTPTREDK FSFGLWTIGY TGADPFGGPT RSDLDVVEGV ERISELGAYG    50
LTFHDDDLFA FGSTDAERQT QIDRLKGALS DTGIVVPMVT TNLFSAPVFK 100
DGGFTSNDRA VRRFAIHKVL RNIDLAAELG AQTFVMWGGR EGAEYDSAKD 150
VRGALERYRE AVNLLGDYVT DKGYDIRFAI EPKPNEPRGD ILLPTLGHAL 200
AFIETLERPE LVGVNPEVGH EQMAGLNFTA GIMQALYQGK LFHIDLNGQR 250
GIKYDQDLVF GHGDLQNAFS LVDLLENGGV GGGRSYDGPR HFDYKPSRTE 300
DITGVWDSAA ANMRMYLLLK ERAQAFRADP EVQEALAAAK VQDIYTPTLD 350
EGESYDDILA DRSSYEDFAA DEYFDAKGFG FVRLNQLALE HLMGARS 397
Length:397
Mass (Da):43,821
Last modified:May 29, 2013 - v1
Checksum:iB5A72A571A9E3A16
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
HE614873 Genomic DNA. Translation: CCE74800.1.
RefSeqiWP_015489588.1. NC_020891.1.
YP_007685144.1. NC_020891.1.

Genome annotation databases

EnsemblBacteriaiCCE74800; CCE74800; CMN_00844.
GeneIDi15074664.
KEGGicmc:CMN_00844.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
HE614873 Genomic DNA. Translation: CCE74800.1 .
RefSeqi WP_015489588.1. NC_020891.1.
YP_007685144.1. NC_020891.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CCE74800 ; CCE74800 ; CMN_00844 .
GeneIDi 15074664.
KEGGi cmc:CMN_00844.

Phylogenomic databases

KOi K01805.

Family and domain databases

Gene3Di 3.20.20.150. 1 hit.
HAMAPi MF_00455. Xylose_isom_A.
InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
IPR013453. XylA_actinobac.
IPR001998. Xylose_isomerase.
[Graphical view ]
Pfami PF01261. AP_endonuc_2. 1 hit.
[Graphical view ]
PRINTSi PR00688. XYLOSISMRASE.
SUPFAMi SSF51658. SSF51658. 1 hit.
TIGRFAMsi TIGR02631. xylA_Arthro. 1 hit.
PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Gartemann K.
    Submitted (NOV-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Type strain: NCPPB 2581Imported.
  2. "The genome sequence of the maize-pathogen Clavibacter michiganensis subsp. nebraskensis."
    Gartemann K.H., Blom J., Dreiseikelmann B., Fluegel M., Jaenicke S., Linke B., Sczcepanowski R., Wittmann J., Goesmann A., Puehler A., Eichenlaub R., Rueckert C.
    Submitted (APR-2013) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Type strain: NCPPB 2581Imported.

Entry informationi

Entry nameiM5B7B2_9MICO
AccessioniPrimary (citable) accession number: M5B7B2
Entry historyi
Integrated into UniProtKB/TrEMBL: May 29, 2013
Last sequence update: May 29, 2013
Last modified: September 3, 2014
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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