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M5B7B2 (M5B7B2_9MICO) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 10. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length397 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

D-xylopyranose = D-xylulose. RuleBase RU000609 HAMAP-Rule MF_00455 SAAS SAAS001998

Cofactor

Binds 2 magnesium ions per subunit By similarity. HAMAP-Rule MF_00455

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00455 RuleBase RU000610

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00455 RuleBase RU000610.

Sequence similarities

Belongs to the xylose isomerase family. HAMAP-Rule MF_00455

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site541 By similarity HAMAP-Rule MF_00455
Active site571 By similarity HAMAP-Rule MF_00455
Metal binding1811Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2171Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2171Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding2201Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding2451Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2551Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding2571Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding2931Magnesium 1 By similarity HAMAP-Rule MF_00455

Sequences

Sequence LengthMass (Da)Tools
M5B7B2 [UniParc].

Last modified May 29, 2013. Version 1.
Checksum: B5A72A571A9E3A16

FASTA39743,821
        10         20         30         40         50         60 
MALTPTREDK FSFGLWTIGY TGADPFGGPT RSDLDVVEGV ERISELGAYG LTFHDDDLFA 

        70         80         90        100        110        120 
FGSTDAERQT QIDRLKGALS DTGIVVPMVT TNLFSAPVFK DGGFTSNDRA VRRFAIHKVL 

       130        140        150        160        170        180 
RNIDLAAELG AQTFVMWGGR EGAEYDSAKD VRGALERYRE AVNLLGDYVT DKGYDIRFAI 

       190        200        210        220        230        240 
EPKPNEPRGD ILLPTLGHAL AFIETLERPE LVGVNPEVGH EQMAGLNFTA GIMQALYQGK 

       250        260        270        280        290        300 
LFHIDLNGQR GIKYDQDLVF GHGDLQNAFS LVDLLENGGV GGGRSYDGPR HFDYKPSRTE 

       310        320        330        340        350        360 
DITGVWDSAA ANMRMYLLLK ERAQAFRADP EVQEALAAAK VQDIYTPTLD EGESYDDILA 

       370        380        390 
DRSSYEDFAA DEYFDAKGFG FVRLNQLALE HLMGARS 

« Hide

References

[1]Gartemann K.
Submitted (NOV-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Type strain: NCPPB 2581 EMBL CCE74800.1.
[2]"The genome sequence of the maize-pathogen Clavibacter michiganensis subsp. nebraskensis."
Gartemann K.H., Blom J., Dreiseikelmann B., Fluegel M., Jaenicke S., Linke B., Sczcepanowski R., Wittmann J., Goesmann A., Puehler A., Eichenlaub R., Rueckert C.
Submitted (APR-2013) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Type strain: NCPPB 2581 EMBL CCE74800.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
HE614873 Genomic DNA. Translation: CCE74800.1.
RefSeqYP_007685144.1. NC_020891.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCCE74800; CCE74800; CMN_00844.
GeneID15074664.
KEGGcmc:CMN_00844.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01805.

Family and domain databases

Gene3D3.20.20.150. 1 hit.
HAMAPMF_00455. Xylose_isom_A.
InterProIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013453. XylA_actinobac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSPR00688. XYLOSISMRASE.
SUPFAMSSF51658. SSF51658. 1 hit.
TIGRFAMsTIGR02631. xylA_Arthro. 1 hit.
PROSITEPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameM5B7B2_9MICO
AccessionPrimary (citable) accession number: M5B7B2
Entry history
Integrated into UniProtKB/TrEMBL: May 29, 2013
Last sequence update: May 29, 2013
Last modified: June 11, 2014
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)