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M5A4W9

- M5A4W9_9ACTN

UniProt

M5A4W9 - M5A4W9_9ACTN

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Protein

Xylose isomerase

Gene

YM304_31700

Organism
Ilumatobacter coccineus YM16-304
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

D-xylopyranose = D-xylulose.UniRule annotationSAAS annotation

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. xylose isomerase activity Source: UniProtKB-EC

GO - Biological processi

  1. D-xylose metabolic process Source: UniProtKB-KW
  2. pentose-phosphate shunt Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotation

Keywords - Biological processi

Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotation, Xylose metabolismUniRule annotationSAAS annotation

Keywords - Ligandi

Metal-bindingUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
Gene namesi
ORF Names:YM304_31700Imported
OrganismiIlumatobacter coccineus YM16-304Imported
Taxonomic identifieri1313172 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaAcidimicrobidaeAcidimicrobialesAcidimicrobineaeAcidimicrobiaceaeIlumatobacter
ProteomesiUP000011863: Chromosome

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the xylose isomerase family.UniRule annotation

Phylogenomic databases

KOiK01805.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamiPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSiPR00688. XYLOSISMRASE.
SUPFAMiSSF51658. SSF51658. 1 hit.
PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

M5A4W9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MASTQRFGAG IWHFATYVDR YATDGYGEPR SVIDAIDLAG QVRDLSVVDL
60 70 80 90 100
NYPFFGGDFT NEQVKTALDR NGLGVIGITP EIYTRVFAKG AFTNPDHGVR
110 120 130 140 150
RLAHDLVTEA CDVVRSFGAD YVKLWPGQDG WDYPFQVDYG ELWQASMDGV
160 170 180 190 200
GQLADENPDL RFVVEYKPRE PRVHMSYSSV ARTLLGIEKI GLPNIGILLD
210 220 230 240 250
FGHALFGGEA PSDSAQLAID YGRLFGMDVN DNLRGWDDDM VAGTVHPIEL
260 270 280 290 300
LEFFYTLRKN NWEGVWQLDQ FPFREDSVEA ADAAIDFLKA CDRALDKMDM
310 320
DAMREAQARH DAMGALRIAQ QALFSSY
Length:327
Mass (Da):36,589
Last modified:May 29, 2013 - v1
Checksum:iC3458AB63E624A14
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP012057 Genomic DNA. Translation: BAN03484.1.
RefSeqiWP_015442731.1. NC_020520.1.
YP_007565422.1. NC_020520.1.

Genome annotation databases

EnsemblBacteriaiBAN03484; BAN03484; YM304_31700.
GeneIDi14796846.
KEGGiaym:YM304_31700.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP012057 Genomic DNA. Translation: BAN03484.1 .
RefSeqi WP_015442731.1. NC_020520.1.
YP_007565422.1. NC_020520.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAN03484 ; BAN03484 ; YM304_31700 .
GeneIDi 14796846.
KEGGi aym:YM304_31700.

Phylogenomic databases

KOi K01805.

Family and domain databases

Gene3Di 3.20.20.150. 1 hit.
InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
IPR001998. Xylose_isomerase.
[Graphical view ]
Pfami PF01261. AP_endonuc_2. 1 hit.
[Graphical view ]
PRINTSi PR00688. XYLOSISMRASE.
SUPFAMi SSF51658. SSF51658. 1 hit.
PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Ilumatobacter nonamiense sp. nov. and Ilumatobacter coccineum sp. nov., isolated from seashore sand."
    Matsumoto A., Kasai H., Matsuo Y., Shizuri Y., Ichikawa N., Fujita N., Omura S., Takahashi Y.
    Int. J. Syst. Evol. Microbiol. 63:3404-3408(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: YM16-304Imported.

Entry informationi

Entry nameiM5A4W9_9ACTN
AccessioniPrimary (citable) accession number: M5A4W9
Entry historyi
Integrated into UniProtKB/TrEMBL: May 29, 2013
Last sequence update: May 29, 2013
Last modified: October 29, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3