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M5A4W9

- M5A4W9_9ACTN

UniProt

M5A4W9 - M5A4W9_9ACTN

Protein

Xylose isomerase

Gene

YM304_31700

Organism
Ilumatobacter coccineus YM16-304
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 12 (01 Oct 2014)
      Sequence version 1 (29 May 2013)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    D-xylopyranose = D-xylulose.UniRule annotationSAAS annotation

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. xylose isomerase activity Source: UniProtKB-EC

    GO - Biological processi

    1. D-xylose metabolic process Source: UniProtKB-KW
    2. pentose-phosphate shunt Source: UniProtKB-KW

    Keywords - Molecular functioni

    IsomeraseUniRule annotationSAAS annotationImported

    Keywords - Biological processi

    Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotation, Xylose metabolismUniRule annotationSAAS annotation

    Keywords - Ligandi

    Metal-bindingUniRule annotationSAAS annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
    Gene namesi
    ORF Names:YM304_31700Imported
    OrganismiIlumatobacter coccineus YM16-304Imported
    Taxonomic identifieri1313172 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaAcidimicrobidaeAcidimicrobialesAcidimicrobineaeAcidimicrobiaceaeIlumatobacter
    ProteomesiUP000011863: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation
    Cytoplasm By similarity

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotation
    Homotetramer By similarity.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the xylose isomerase family.UniRule annotation

    Phylogenomic databases

    KOiK01805.

    Family and domain databases

    Gene3Di3.20.20.150. 1 hit.
    InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
    IPR001998. Xylose_isomerase.
    [Graphical view]
    PfamiPF01261. AP_endonuc_2. 1 hit.
    [Graphical view]
    PRINTSiPR00688. XYLOSISMRASE.
    SUPFAMiSSF51658. SSF51658. 1 hit.
    PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    M5A4W9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MASTQRFGAG IWHFATYVDR YATDGYGEPR SVIDAIDLAG QVRDLSVVDL    50
    NYPFFGGDFT NEQVKTALDR NGLGVIGITP EIYTRVFAKG AFTNPDHGVR 100
    RLAHDLVTEA CDVVRSFGAD YVKLWPGQDG WDYPFQVDYG ELWQASMDGV 150
    GQLADENPDL RFVVEYKPRE PRVHMSYSSV ARTLLGIEKI GLPNIGILLD 200
    FGHALFGGEA PSDSAQLAID YGRLFGMDVN DNLRGWDDDM VAGTVHPIEL 250
    LEFFYTLRKN NWEGVWQLDQ FPFREDSVEA ADAAIDFLKA CDRALDKMDM 300
    DAMREAQARH DAMGALRIAQ QALFSSY 327
    Length:327
    Mass (Da):36,589
    Last modified:May 29, 2013 - v1
    Checksum:iC3458AB63E624A14
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP012057 Genomic DNA. Translation: BAN03484.1.
    RefSeqiWP_015442731.1. NC_020520.1.
    YP_007565422.1. NC_020520.1.

    Genome annotation databases

    EnsemblBacteriaiBAN03484; BAN03484; YM304_31700.
    GeneIDi14796846.
    KEGGiaym:YM304_31700.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP012057 Genomic DNA. Translation: BAN03484.1 .
    RefSeqi WP_015442731.1. NC_020520.1.
    YP_007565422.1. NC_020520.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAN03484 ; BAN03484 ; YM304_31700 .
    GeneIDi 14796846.
    KEGGi aym:YM304_31700.

    Phylogenomic databases

    KOi K01805.

    Family and domain databases

    Gene3Di 3.20.20.150. 1 hit.
    InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
    IPR001998. Xylose_isomerase.
    [Graphical view ]
    Pfami PF01261. AP_endonuc_2. 1 hit.
    [Graphical view ]
    PRINTSi PR00688. XYLOSISMRASE.
    SUPFAMi SSF51658. SSF51658. 1 hit.
    PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Ilumatobacter nonamiense sp. nov. and Ilumatobacter coccineum sp. nov., isolated from seashore sand."
      Matsumoto A., Kasai H., Matsuo Y., Shizuri Y., Ichikawa N., Fujita N., Omura S., Takahashi Y.
      Int. J. Syst. Evol. Microbiol. 63:3404-3408(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: YM16-304Imported.

    Entry informationi

    Entry nameiM5A4W9_9ACTN
    AccessioniPrimary (citable) accession number: M5A4W9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 29, 2013
    Last sequence update: May 29, 2013
    Last modified: October 1, 2014
    This is version 12 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3