Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Ilumatobacter coccineus YM16-304
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotationSAAS annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

Cofactori

Mg2+UniRule annotationSAAS annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei146 – 1461UniRule annotation
Active sitei586 – 5861UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotation

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotation

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotation, PyruvateImported

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotationSAAS annotation (EC:4.1.1.31UniRule annotationSAAS annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotationImported
ORF Names:YM304_18890Imported
OrganismiIlumatobacter coccineus YM16-304Imported
Taxonomic identifieri1313172 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaAcidimicrobiiaAcidimicrobialesAcidimicrobineaeAcidimicrobiaceaeIlumatobacter
ProteomesiUP000011863 Componenti: Chromosome

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

KOiK01595.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

M5A019-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSTPDTSGYE ELGNDIRLLG RLLGDVVREQ AGDDTFELVE SVRQIAVEGR
60 70 80 90 100
RSGTSSVDDL QRTLGEQPID QQLHVIRAFD WLSLLANTAE DVHVERRRRH
110 120 130 140 150
HRRSGSGPQP GSLEAALDAI SSTGTPIDAI ASVVADLQVS PVITAHPTEV
160 170 180 190 200
RRKTILDVLG VIADLLEERS LLDDSDPARA EIEAALDVKI LTLWQTAILR
210 220 230 240 250
LSKLRVSDEI NEALRYYDAS LFETIPTLER DLERLAADRL GVDDLDASSV
260 270 280 290 300
VSMGSWIGGD RDGNPFVTAE VMRLAIQRQA ETALGHHLDA LYALSTELSM
310 320 330 340 350
SARLITPTPE LEALAEASED ESRFRADEPY RRALRGMYAR LYAFADHVLD
360 370 380 390 400
AGAGALGGPP PRVPLEAYPS LDQLLADLDV VAASLRSHGA RDLAEASVEP
410 420 430 440 450
VRRAVATFGA HLCGLDMRQN SAVHEAVVAD LFAQAGVCPD YLELDEDARV
460 470 480 490 500
EILSAELTSP RGLRHRTAVY SDQTRQELAV LDAAAEAVAE LGARAVPHYV
510 520 530 540 550
ISMATAVSDV LEVAVLLKEI GLMTVATDDA PASAQLDIVP LFETIGDLAA
560 570 580 590 600
SAATVTALME HPTYRDLVAS RGNRQEVMIG YSDSNKDGGY LSSQWNLFHA
610 620 630 640 650
QASLLAAADD AGVRLRLFHG RGGTVGRGGG PAYQAILAQP AGSVDRAIRV
660 670 680 690 700
TEQGEMVAAK YAQPALARRN LETLVAATLH ASCRSADAAD APDPRYVAAM
710 720 730 740 750
NDMASTAFDA YQRLVYGDDR FVTFFRQITP TNEIATLNVG SRPASRKKSQ
760 770 780 790 800
AIEDLRAIPW VFGWTQCRLM IPAWFGAGSA FDTFAAADDA NADLLTEMYG
810 820 830 840 850
SWGFFRTIID NMGMVLAKAD IDIGRRYADV LVEDDSTRSD IFGRIEQEHA
860 870 880 890 900
TTRTWHAHIT GSPDPLNDNP LLARSLRNRY PYLDPLHVMQ VDLLRRFRDG
910 920
DDDELVQRGI QLTINAIATG IRNSG
Length:925
Mass (Da):100,639
Last modified:May 29, 2013 - v1
Checksum:iC4426FB6F913950B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP012057 Genomic DNA. Translation: BAN02203.1.
RefSeqiWP_015441450.1. NC_020520.1.
YP_007564141.1. NC_020520.1.

Genome annotation databases

EnsemblBacteriaiBAN02203; BAN02203; YM304_18890.
KEGGiaym:YM304_18890.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP012057 Genomic DNA. Translation: BAN02203.1.
RefSeqiWP_015441450.1. NC_020520.1.
YP_007564141.1. NC_020520.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAN02203; BAN02203; YM304_18890.
KEGGiaym:YM304_18890.

Phylogenomic databases

KOiK01595.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Ilumatobacter nonamiense sp. nov. and Ilumatobacter coccineum sp. nov., isolated from seashore sand."
    Matsumoto A., Kasai H., Matsuo Y., Shizuri Y., Ichikawa N., Fujita N., Omura S., Takahashi Y.
    Int. J. Syst. Evol. Microbiol. 63:3404-3408(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: YM16-304Imported.

Entry informationi

Entry nameiM5A019_9ACTN
AccessioniPrimary (citable) accession number: M5A019
Entry historyi
Integrated into UniProtKB/TrEMBL: May 29, 2013
Last sequence update: May 29, 2013
Last modified: June 24, 2015
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.