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M5A019

- M5A019_9ACTN

UniProt

M5A019 - M5A019_9ACTN

Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Ilumatobacter coccineus YM16-304
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 12 (01 Oct 2014)
      Sequence version 1 (29 May 2013)
      Previous versions | rss
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    Functioni

    Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotationSAAS annotation

    Catalytic activityi

    Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

    Cofactori

    Magnesium.UniRule annotationSAAS annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei146 – 1461UniRule annotation
    Active sitei586 – 5861UniRule annotation

    GO - Molecular functioni

    1. magnesium ion binding Source: UniProtKB-HAMAP
    2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. carbon fixation Source: UniProtKB-HAMAP
    2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
    3. tricarboxylic acid cycle Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotationSAAS annotationImported

    Keywords - Biological processi

    Carbon dioxide fixationUniRule annotationSAAS annotation

    Keywords - Ligandi

    MagnesiumUniRule annotationSAAS annotation, PyruvateImported

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
    Short name:
    PEPCUniRule annotation
    Short name:
    PEPCaseUniRule annotation
    Gene namesi
    Name:ppcUniRule annotationImported
    ORF Names:YM304_18890Imported
    OrganismiIlumatobacter coccineus YM16-304Imported
    Taxonomic identifieri1313172 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaAcidimicrobidaeAcidimicrobialesAcidimicrobineaeAcidimicrobiaceaeIlumatobacter
    ProteomesiUP000011863: Chromosome

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotation

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the PEPCase type 1 family.UniRule annotation

    Phylogenomic databases

    KOiK01595.

    Family and domain databases

    HAMAPiMF_00595. PEPcase_type1.
    InterProiIPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR022805. PEP_COase_bac/pln-type.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view]
    PfamiPF00311. PEPcase. 1 hit.
    [Graphical view]
    PRINTSiPR00150. PEPCARBXLASE.
    SUPFAMiSSF51621. SSF51621. 1 hit.
    PROSITEiPS00781. PEPCASE_1. 1 hit.
    PS00393. PEPCASE_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    M5A019-1 [UniParc]FASTAAdd to Basket

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    MSTPDTSGYE ELGNDIRLLG RLLGDVVREQ AGDDTFELVE SVRQIAVEGR    50
    RSGTSSVDDL QRTLGEQPID QQLHVIRAFD WLSLLANTAE DVHVERRRRH 100
    HRRSGSGPQP GSLEAALDAI SSTGTPIDAI ASVVADLQVS PVITAHPTEV 150
    RRKTILDVLG VIADLLEERS LLDDSDPARA EIEAALDVKI LTLWQTAILR 200
    LSKLRVSDEI NEALRYYDAS LFETIPTLER DLERLAADRL GVDDLDASSV 250
    VSMGSWIGGD RDGNPFVTAE VMRLAIQRQA ETALGHHLDA LYALSTELSM 300
    SARLITPTPE LEALAEASED ESRFRADEPY RRALRGMYAR LYAFADHVLD 350
    AGAGALGGPP PRVPLEAYPS LDQLLADLDV VAASLRSHGA RDLAEASVEP 400
    VRRAVATFGA HLCGLDMRQN SAVHEAVVAD LFAQAGVCPD YLELDEDARV 450
    EILSAELTSP RGLRHRTAVY SDQTRQELAV LDAAAEAVAE LGARAVPHYV 500
    ISMATAVSDV LEVAVLLKEI GLMTVATDDA PASAQLDIVP LFETIGDLAA 550
    SAATVTALME HPTYRDLVAS RGNRQEVMIG YSDSNKDGGY LSSQWNLFHA 600
    QASLLAAADD AGVRLRLFHG RGGTVGRGGG PAYQAILAQP AGSVDRAIRV 650
    TEQGEMVAAK YAQPALARRN LETLVAATLH ASCRSADAAD APDPRYVAAM 700
    NDMASTAFDA YQRLVYGDDR FVTFFRQITP TNEIATLNVG SRPASRKKSQ 750
    AIEDLRAIPW VFGWTQCRLM IPAWFGAGSA FDTFAAADDA NADLLTEMYG 800
    SWGFFRTIID NMGMVLAKAD IDIGRRYADV LVEDDSTRSD IFGRIEQEHA 850
    TTRTWHAHIT GSPDPLNDNP LLARSLRNRY PYLDPLHVMQ VDLLRRFRDG 900
    DDDELVQRGI QLTINAIATG IRNSG 925
    Length:925
    Mass (Da):100,639
    Last modified:May 29, 2013 - v1
    Checksum:iC4426FB6F913950B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP012057 Genomic DNA. Translation: BAN02203.1.
    RefSeqiYP_007564141.1. NC_020520.1.

    Genome annotation databases

    EnsemblBacteriaiBAN02203; BAN02203; YM304_18890.
    GeneIDi14795869.
    KEGGiaym:YM304_18890.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP012057 Genomic DNA. Translation: BAN02203.1 .
    RefSeqi YP_007564141.1. NC_020520.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAN02203 ; BAN02203 ; YM304_18890 .
    GeneIDi 14795869.
    KEGGi aym:YM304_18890.

    Phylogenomic databases

    KOi K01595.

    Family and domain databases

    HAMAPi MF_00595. PEPcase_type1.
    InterProi IPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR022805. PEP_COase_bac/pln-type.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view ]
    Pfami PF00311. PEPcase. 1 hit.
    [Graphical view ]
    PRINTSi PR00150. PEPCARBXLASE.
    SUPFAMi SSF51621. SSF51621. 1 hit.
    PROSITEi PS00781. PEPCASE_1. 1 hit.
    PS00393. PEPCASE_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Ilumatobacter nonamiense sp. nov. and Ilumatobacter coccineum sp. nov., isolated from seashore sand."
      Matsumoto A., Kasai H., Matsuo Y., Shizuri Y., Ichikawa N., Fujita N., Omura S., Takahashi Y.
      Int. J. Syst. Evol. Microbiol. 63:3404-3408(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: YM16-304Imported.

    Entry informationi

    Entry nameiM5A019_9ACTN
    AccessioniPrimary (citable) accession number: M5A019
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 29, 2013
    Last sequence update: May 29, 2013
    Last modified: October 1, 2014
    This is version 12 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3