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Protein
Submitted name:

Ribulose bisphosphate carboxylase small chain, RuBisCO small subunit

Gene

S58_58780

Organism
Bradyrhizobium oligotrophicum S58
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose bisphosphate carboxylase small chain, RuBisCO small subunitImported
Gene namesi
ORF Names:S58_58780Imported
OrganismiBradyrhizobium oligotrophicum S58Imported
Taxonomic identifieri1245469 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium
ProteomesiUP000011841 Componenti: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01602.

Family and domain databases

Gene3Di3.30.190.10. 1 hit.
InterProiIPR000894. RuBisCO_sc_dom.
[Graphical view]
PfamiPF00101. RuBisCO_small. 1 hit.
[Graphical view]
SMARTiSM00961. RuBisCO_small. 1 hit.
[Graphical view]
SUPFAMiSSF55239. SSF55239. 1 hit.

Sequencei

Sequence statusi: Complete.

M4ZZD8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRVTQGCFSF LPDLTDDQIT AQIQYCLEKG WAVNIEFTDD PHPRNTYWEM
60 70 80 90 100
WGLPMFDLRD AAGIMRELSE CRKIYGDRYI RISAFDSSHG WESIRLSFIV
110 120 130
NRPQNEPGFR LDRQETVGRN QRYSTRSYAA ERPEGERYS
Length:139
Mass (Da):16,427
Last modified:May 29, 2013 - v1
Checksum:iF15107C191593DB1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP012603 Genomic DNA. Translation: BAM91855.1.
RefSeqiWP_015668941.1. NC_020453.1.

Genome annotation databases

EnsemblBacteriaiBAM91855; BAM91855; S58_58780.
KEGGiaol:S58_58780.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP012603 Genomic DNA. Translation: BAM91855.1.
RefSeqiWP_015668941.1. NC_020453.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAM91855; BAM91855; S58_58780.
KEGGiaol:S58_58780.

Phylogenomic databases

KOiK01602.

Family and domain databases

Gene3Di3.30.190.10. 1 hit.
InterProiIPR000894. RuBisCO_sc_dom.
[Graphical view]
PfamiPF00101. RuBisCO_small. 1 hit.
[Graphical view]
SMARTiSM00961. RuBisCO_small. 1 hit.
[Graphical view]
SUPFAMiSSF55239. SSF55239. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome Analysis Suggests that the Soil Oligotrophic Bacterium Agromonas oligotrophica (Bradyrhizobium oligotrophicum) Is a Nitrogen-Fixing Symbiont of Aeschynomene indica."
    Okubo T., Fukushima S., Itakura M., Oshima K., Longtonglang A., Teaumroong N., Mitsui H., Hattori M., Hattori R., Hattori T., Minamisawa K.
    Appl. Environ. Microbiol. 79:2542-2551(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: S58Imported.

Entry informationi

Entry nameiM4ZZD8_9BRAD
AccessioniPrimary (citable) accession number: M4ZZD8
Entry historyi
Integrated into UniProtKB/TrEMBL: May 29, 2013
Last sequence update: May 29, 2013
Last modified: July 22, 2015
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.