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M4ZC32

- M4ZC32_9BRAD

UniProt

M4ZC32 - M4ZC32_9BRAD

Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Bradyrhizobium oligotrophicum S58
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 12 (01 Oct 2014)
      Sequence version 1 (29 May 2013)
      Previous versions | rss
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    Functioni

    Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotationSAAS annotation

    Catalytic activityi

    Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

    Cofactori

    Magnesium.UniRule annotationSAAS annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei161 – 1611UniRule annotation
    Active sitei590 – 5901UniRule annotation

    GO - Molecular functioni

    1. magnesium ion binding Source: UniProtKB-HAMAP
    2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. carbon fixation Source: UniProtKB-HAMAP
    2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
    3. tricarboxylic acid cycle Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotationSAAS annotation

    Keywords - Biological processi

    Carbon dioxide fixationUniRule annotationSAAS annotation

    Keywords - Ligandi

    MagnesiumUniRule annotationSAAS annotation, PyruvateImported

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
    Short name:
    PEPCUniRule annotation
    Short name:
    PEPCaseUniRule annotation
    Gene namesi
    Name:ppcUniRule annotation
    ORF Names:S58_50320Imported
    OrganismiBradyrhizobium oligotrophicum S58Imported
    Taxonomic identifieri1245469 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium
    ProteomesiUP000011841: Chromosome

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotation

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the PEPCase type 1 family.UniRule annotation

    Phylogenomic databases

    KOiK01595.

    Family and domain databases

    HAMAPiMF_00595. PEPcase_type1.
    InterProiIPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR022805. PEP_COase_bac/pln-type.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view]
    PfamiPF00311. PEPcase. 1 hit.
    [Graphical view]
    PRINTSiPR00150. PEPCARBXLASE.
    SUPFAMiSSF51621. SSF51621. 1 hit.
    PROSITEiPS00781. PEPCASE_1. 1 hit.
    PS00393. PEPCASE_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    M4ZC32-1 [UniParc]FASTAAdd to Basket

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    MSPQIMPSED TRPNRAAEAQ AMEEDARLRD DIRLLGRILG DTVRDQEGAD    50
    VFDLVERIRQ TSVRFHRDED RQARHELEHI LDGMTTAETV RIVRAFSYFS 100
    HLANIAEDQN NIRRMRAKSD ANGGAGMLAS TLAHAKSAGF EAADLRKFFS 150
    TALVSPVLTA HPTEVRRKST MDREMEVAML LDRRERMQLT PDEREANDEA 200
    LRRAVLTLWQ TNLLRRTKLT VLDEVTNGLS FYDYTFLREV PRLLCALEDR 250
    LNDGAEVAGD LASFLRMGSW IGGDRDGNPF VTAEVMRGTL KLQSSLALHY 300
    YLEELHLLGG ELSMAAHLAD VSEELRALAE RSPDTSPHRI GEPYRLAVSG 350
    IYARLAATAK KLGIQISRLP VGAVAPYDSV KEFQDDLDVL HRSLIANNAE 400
    VIARGRLRLL RRAIDCFGFH LARLDIRQNS AVHERTVAEL IDTAMPGMSY 450
    LALSEDARVG LLVSELRNTR PLVSQFIKYS DETVGELALF RAAADAHATF 500
    GADVISQCII SMCKGMSDML EVALLLKEVG LIDPSGRCGV NIVPLFETIE 550
    DLQASSGIMD RMLALHDYRR LVDSRGAVQE VMLGYSDSNK DGGFVTSGWE 600
    LYKAEIGLVD IFERHGVRLR LFHGRGGSVG RGGGPSYDAI IAQPGGAVNG 650
    QIRITEQGEI ISSKYSNAEV GRNNLDILAA ATLEASLLHP RQPAPKREYL 700
    TAMDRLSELA FKAYRGLVYE TDGFVEYFWS STVINEIATL NIGSRPASRK 750
    KTRAIEDLRA IPWVFSWAQC RLMLPGWYGF GSAVESWIAE NPEQGMPFLR 800
    ELYREWPFFR MLLSNMDMVL AKSSIAIASR YAELVPDEAL REKIFGRIRR 850
    EWNLVIETLL DIMGQERLLQ GNPLLERSVR NRFPYLDPLN HVQVELLKEH 900
    RAQNPDEQVL RGIQLTINGI SAGLRNTG 928
    Length:928
    Mass (Da):103,919
    Last modified:May 29, 2013 - v1
    Checksum:iEDA06FBF55F344A2
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP012603 Genomic DNA. Translation: BAM91011.1.
    RefSeqiYP_007514598.1. NC_020453.1.

    Genome annotation databases

    EnsemblBacteriaiBAM91011; BAM91011; S58_50320.
    GeneIDi14685739.
    KEGGiaol:S58_50320.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP012603 Genomic DNA. Translation: BAM91011.1 .
    RefSeqi YP_007514598.1. NC_020453.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAM91011 ; BAM91011 ; S58_50320 .
    GeneIDi 14685739.
    KEGGi aol:S58_50320.

    Phylogenomic databases

    KOi K01595.

    Family and domain databases

    HAMAPi MF_00595. PEPcase_type1.
    InterProi IPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR022805. PEP_COase_bac/pln-type.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view ]
    Pfami PF00311. PEPcase. 1 hit.
    [Graphical view ]
    PRINTSi PR00150. PEPCARBXLASE.
    SUPFAMi SSF51621. SSF51621. 1 hit.
    PROSITEi PS00781. PEPCASE_1. 1 hit.
    PS00393. PEPCASE_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome Analysis Suggests that the Soil Oligotrophic Bacterium Agromonas oligotrophica (Bradyrhizobium oligotrophicum) Is a Nitrogen-Fixing Symbiont of Aeschynomene indica."
      Okubo T., Fukushima S., Itakura M., Oshima K., Longtonglang A., Teaumroong N., Mitsui H., Hattori M., Hattori R., Hattori T., Minamisawa K.
      Appl. Environ. Microbiol. 79:2542-2551(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: S58Imported.

    Entry informationi

    Entry nameiM4ZC32_9BRAD
    AccessioniPrimary (citable) accession number: M4ZC32
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 29, 2013
    Last sequence update: May 29, 2013
    Last modified: October 1, 2014
    This is version 12 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3