Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Ribulose 1,5-bisphosphate carboxylase, large subunit

Gene

TALC_00200

Organism
Thermoplasmatales archaeon BRNA1
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose 1,5-bisphosphate carboxylase, large subunitImported (EC:4.1.1.39Imported)
Gene namesi
ORF Names:TALC_00200Imported
OrganismiThermoplasmatales archaeon BRNA1Imported
Taxonomic identifieri1054217 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermoplasmataThermoplasmatales
ProteomesiUP000012076 Componenti: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

KOiK01601.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.

Sequencei

Sequence statusi: Complete.

M4YJA6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKSYSYLCLG EEIDRDAYVV TKYRVSTDLP MEKAAESIAA EQSTGTWTGI
60 70 80 90 100
STLNDDVFTK YAAKVTEIDG DMVTIAYPEE DFSVEVGAIP QILSVISGNL
110 120 130 140 150
YGLETLKGVR LEDVEFPSSI LKKYKGPKFG DTGLREILGR PEKPLVGTIV
160 170 180 190 200
KPKIGLSPED TAKYIYEAGS GGLTNSKDDE TLVDQKFCPI EARTKAVAEV
210 220 230 240 250
LDRLEEEGHK MLHAVNISTN GQDILQLAED VQSWGAKQIM IDVLTCGYGA
260 270 280 290 300
IQAVAEDPKI KVPIHVHRTM HGAMTKDPFN GISMRVISKL VRMCGGDALH
310 320 330 340 350
IGTLGVGKMA GGIGEGRANQ EACQSGDVPF KTVMPVCSGG MYPGIVPAVM
360 370 380 390 400
KAAGNNIQIQ AGGGVAGHPE GVRGGALAMC QAVDAGFLGV SLDEYAKDHK
410
ELREALERWG QK
Length:412
Mass (Da):44,168
Last modified:May 29, 2013 - v1
Checksum:iD81412F3FF80C2EF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002916 Genomic DNA. Translation: AGI47214.1.
RefSeqiWP_015491731.1. NC_020892.1.
YP_007687374.1. NC_020892.1.

Genome annotation databases

EnsemblBacteriaiAGI47214; AGI47214; TALC_00200.
GeneIDi15077505.
KEGGitar:TALC_00200.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002916 Genomic DNA. Translation: AGI47214.1.
RefSeqiWP_015491731.1. NC_020892.1.
YP_007687374.1. NC_020892.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAGI47214; AGI47214; TALC_00200.
GeneIDi15077505.
KEGGitar:TALC_00200.

Phylogenomic databases

KOiK01601.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Thermoplasmatales-like gut symbionts are pyrrolysine dependent-methanogens."
    Denman S.E., Evans P., Bragg L., Padmanahba J., McKenzie M., Edwards D., Krzycki J., McSweeney C., Morrison M.
    Submitted (JUL-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BRNA1Imported.

Entry informationi

Entry nameiM4YJA6_9EURY
AccessioniPrimary (citable) accession number: M4YJA6
Entry historyi
Integrated into UniProtKB/TrEMBL: May 29, 2013
Last sequence update: May 29, 2013
Last modified: January 7, 2015
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.