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M4R6Q4

- M4R6Q4_BIBTR

UniProt

M4R6Q4 - M4R6Q4_BIBTR

Protein
Submitted name:

Alpha-amylase

Gene

WQG_5280

Organism
Bibersteinia trehalosi USDA-ARS-USMARC-192
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 9 (01 Oct 2014)
      Sequence version 1 (29 May 2013)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. alpha-amylase activity Source: InterPro
    2. calcium ion binding Source: InterPro

    GO - Biological processi

    1. alpha-glucan catabolic process Source: InterPro
    2. cellular oligosaccharide catabolic process Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha-amylaseImported
    Gene namesi
    ORF Names:WQG_5280Imported
    OrganismiBibersteinia trehalosi USDA-ARS-USMARC-192Imported
    Taxonomic identifieri1171377 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeBibersteinia
    ProteomesiUP000011846: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. periplasmic space Source: InterPro

    Family & Domainsi

    Phylogenomic databases

    KOiK01176.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR014635. A_amylase_MalS.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 2 hits.

    Sequencei

    Sequence statusi: Complete.

    M4R6Q4-1 [UniParc]FASTAAdd to Basket

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    MIPQRAHLGD FVKFYLKLTA CKFVFGQFNA LNIAMNKSFL CLCLFGVSNL    50
    FAQSWQHAHF GTFNDDAERH LFQSSAMLTK GNYPLNFLFG EQCYQPQAAM 100
    KLNQSMPLVP CTADIPSIRL FRQGNYRAQI DMHNSIPTLK IHLEQLPEKT 150
    NAELPCPRWN HTPLEIDVSA TFSEGDIVRD FYSGQHAVVK NGKITLMPAE 200
    NADGLLLLEK LENHQQTVFD WKNATVYFVL TDRFYNGDPS NDHSYGRRSD 250
    GMQEIGTFHG GDLRGLTEKL DYLQQLGVNV LWISSPLEQI HGWVGGGNKG 300
    DFPHYAYHGY YHLDWTKIDA NMGSEADLKN LVQQAHQRGI RILFDVVMNH 350
    TGYATLADMQ EFNFGRFYLK SEEISSVLGK NWTDWQPKQG QNWHSFNDFI 400
    HFSDEKAWEN WWGRAWVRAD IGDYDSPKFD DLKMSLSALP DLKTESEQAV 450
    QLPQFFANKG TNAQTLENGK VRDYLISWLS YWVRQYGIDG FRVDTAKHVE 500
    KSTWLELKQA SEQALKEWQQ ENPKESFNAP FWMVGEAWGH GVFQSDYYQN 550
    GFDAMINFDF QDQAKNALAC FADIEPAYRE MNDKLHSFNV LSYLSSHDTR 600
    LFFHSDSEQN IHKQKVAANL LLLSPGAVQI YYGDESGREF GATGSDPVQG 650
    TRSDMNWQDL QQDPAKKVLH QHWQKLAQFR QRHPAIGAGK HQLLSTAQYF 700
    AFSRILNTDK VMIIWAGH 718
    Length:718
    Mass (Da):82,466
    Last modified:May 29, 2013 - v1
    Checksum:i378F3E8AE6A77F09
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003745 Genomic DNA. Translation: AGH37808.1.
    RefSeqiYP_007547599.1. NC_020515.1.

    Genome annotation databases

    EnsemblBacteriaiAGH37808; AGH37808; WQG_5280.
    GeneIDi14782985.
    KEGGibto:WQG_5280.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003745 Genomic DNA. Translation: AGH37808.1 .
    RefSeqi YP_007547599.1. NC_020515.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AGH37808 ; AGH37808 ; WQG_5280 .
    GeneIDi 14782985.
    KEGGi bto:WQG_5280.

    Phylogenomic databases

    KOi K01176.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR014635. A_amylase_MalS.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF036917. Alph_amls_MalS. 1 hit.
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 2 hits.
    ProtoNeti Search...

    Publicationsi

    1. "Annotation of the Bibersteinia trehalsoi USDA-ARS-USMARC-192 complete genome."
      Harhay G.P., Koren S., Phillippy A., McVey D.S., Kuszak J., Clawson M., Harhay D.M., Heaton M., Chitko-Mckown C., Smith T.P.L.
      Submitted (MAR-2013) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: USDA-ARS-USMARC-192Imported.

    Entry informationi

    Entry nameiM4R6Q4_BIBTR
    AccessioniPrimary (citable) accession number: M4R6Q4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 29, 2013
    Last sequence update: May 29, 2013
    Last modified: October 1, 2014
    This is version 9 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3