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Protein
Submitted name:

Putative ribulose bisphosphate carboxylaseoxygenase,large subunit

Gene

rbcL

Organism
Sinorhizobium meliloti (strain Sm2011 / Rm2011 / 2011)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. magnesium ion binding Source: InterPro
  2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbon fixation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
Putative ribulose bisphosphate carboxylaseoxygenase,large subunitImported (EC:4.1.1.39Imported)
Gene namesi
Name:rbcLImported
Ordered Locus Names:SM2011_b20393Imported
Encoded oniPlasmid pSymBImported
OrganismiSinorhizobium meliloti (strain Sm2011 / Rm2011 / 2011)Imported
Taxonomic identifieri1286640 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000011827: Plasmid pSymB

Structurei

3D structure databases

ProteinModelPortaliM4MKZ0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

KOiK01601.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

M4MKZ0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLRITYRIET PGDVEFLAKK IASDQSTGTF VPVPGETEEL KARVAARVLA
60 70 80 90 100
IRHLEPADRA SWPDEAGSAT RFNRADAEIA FPLDAVGTDL SALMTIAIGG
110 120 130 140 150
VYSIKGMTGI RIVDMKLPPE FAAAHPGPQF GVVGSRRLTG VEGRPIIGTI
160 170 180 190 200
VKPALGLRPE ETAVLVGELL SSGVDFIKDD EKLMSPAYSP LSARIAAIMP
210 220 230 240 250
RILDHEQKTG KKVMYAFGIS HTDPDEMMRN HDLVVAAGGN AAVVNINSVG
260 270 280 290 300
MGGVAFLRKR SGLVLHAHRN GWDILTRHGG LGMEFSVWQQ FWRLLGVDQF
310 320 330 340 350
QINGIRVKYW EPDESFVKSF EAVSTPLFTK DDCPLPVVGS GQWGGQAPET
360 370 380 390 400
YARTGHTTDL LYLCGGGIVS HPGGPGAGVR AVRQAWEAAV AGIPLADYAR
410
DHPELAQSLE KFADGKGA
Length:418
Mass (Da):44,897
Last modified:May 29, 2013 - v1
Checksum:i1757E4A35319E363
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP004139 Genomic DNA. Translation: AGG71379.1.
RefSeqiWP_010975267.1. NC_020560.1.
YP_007613124.1. NC_020560.1.

Genome annotation databases

EnsemblBacteriaiAGG71379; AGG71379; SM2011_b20393.
GeneIDi14755766.
KEGGismel:SM2011_b20393.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP004139 Genomic DNA. Translation: AGG71379.1.
RefSeqiWP_010975267.1. NC_020560.1.
YP_007613124.1. NC_020560.1.

3D structure databases

ProteinModelPortaliM4MKZ0.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAGG71379; AGG71379; SM2011_b20393.
GeneIDi14755766.
KEGGismel:SM2011_b20393.

Phylogenomic databases

KOiK01601.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Next-generation annotation of prokaryotic genomes with EuGene-P: application to Sinorhizobium meliloti 2011."
    Sallet E., Roux B., Sauviac L., Jardinaud M.F., Carrere S., Faraut T., de Carvalho-Niebel F., Gouzy J., Gamas P., Capela D., Bruand C., Schiex T.
    DNA Res. 20:339-354(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Sm2011 / Rm2011 / 2011Imported.
    Plasmid: pSymB

Entry informationi

Entry nameiM4MKZ0_SINM2
AccessioniPrimary (citable) accession number: M4MKZ0
Entry historyi
Integrated into UniProtKB/TrEMBL: May 29, 2013
Last sequence update: May 29, 2013
Last modified: February 4, 2015
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported, PlasmidImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.