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M4KRF2 (M4KRF2_BACIU) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 8. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Alpha-amylase RuleBase RU361134

EC=3.2.1.1 RuleBase RU361134
Gene names
Name:amyE EMBL AGE62151.1
ORF Names:C663_0294 EMBL AGE62151.1
OrganismBacillus subtilis XF-1 [Complete proteome] EMBL AGE62151.1
Taxonomic identifier1233100 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus

Protein attributes

Sequence length659 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units. RuleBase RU361134

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Sequences

Sequence LengthMass (Da)Tools
M4KRF2 [UniParc].

Last modified May 29, 2013. Version 1.
Checksum: 7F72EE297347047A

FASTA65972,428
        10         20         30         40         50         60 
MFAKRFKTSL LPLFAGFLLL FHLVLAGPTA ANAETANKSN ELTAPSIKSG TILHAWNWSF 

        70         80         90        100        110        120 
NTLKHNMKDI HDAGYTAIQT SPINQVKEGN QGNKSMSNWY WLYQPTSYQI GNRYLGTEQE 

       130        140        150        160        170        180 
FKEMCAAAEE YGIKVIVDAV INHTTSDYAA ISNEIKSIPN WTHGNTQIKN WSDRWDVTQN 

       190        200        210        220        230        240 
SLLGLYDWNT QNTQVQSYLK RFLERALNDG ADGFRFDAAK HIELPDDGSY GSQFWPNITN 

       250        260        270        280        290        300 
TSAEFQYGEI LQDSASRDAA YANYMNVTAS NYGHSIRSAL KNRNLGVSNI SHYASDVSAD 

       310        320        330        340        350        360 
KLVTWVESHD TYANDDEEST WMSDDDIRLG WAVIASRSGS TPLFFSRPEG GGNGVRFPGK 

       370        380        390        400        410        420 
SQIGDRGSAL FEDQAITAVN RFHNVMAGQP EELSNPNGNN QIFMNQRGSH GVVLANTGSS 

       430        440        450        460        470        480 
SVSINTPTKL PNGRYDNKAG AGSFQVNDGK LTGTINARSV AVLYPDDIAK APHVFLENYK 

       490        500        510        520        530        540 
TGVTHSFNDQ LTITLRADAN TTKAVYQINN GPETAFKDGD QFTIGKGDPF GKTYTIILKG 

       550        560        570        580        590        600 
TNSDGVTKTE EYSFVKRDPA SAKTIGYQNP NHWSQVNAYI YKHDGGRAIE LTGSWPGKPM 

       610        620        630        640        650 
TKNADGIYTL TLPADTDTTN AKVIFNNGSA QVPGQNQPGF DYVQNGLYND SGLSGSLPH 

« Hide

References

[1]"Genome Sequencing of Bacillus subtilis Strain XF-1 with High Efficiency in the Suppression of Plasmodiophora brassicae."
Guo S., Mao Z., Wu Y., Hao K., He P., He Y.
Genome Announc. 1:E0006613-E0006613(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: XF-1 EMBL AGE62151.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP004019 Genomic DNA. Translation: AGE62151.1.
RefSeqYP_007425488.1. NC_020244.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGE62151; AGE62151; C663_0294.
GeneID14560427.
KEGGbsx:C663_0294.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00632. Aamy_C. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameM4KRF2_BACIU
AccessionPrimary (citable) accession number: M4KRF2
Entry history
Integrated into UniProtKB/TrEMBL: May 29, 2013
Last sequence update: May 29, 2013
Last modified: July 9, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)