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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Brassica rapa subsp. pekinensis (Chinese cabbage) (Brassica pekinensis)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiBrassica rapa subsp. pekinensis (Chinese cabbage) (Brassica pekinensis)Imported
Taxonomic identifieri51351 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeBrassiceaeBrassica
Proteomesi
  • UP000011750 Componenti: Chromosome A05

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

Protein-protein interaction databases

STRINGi3711.Bra034727.1-P.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini35 – 107HSAInterPro annotationAdd BLAST73
Domaini515 – 680Helicase ATP-bindingInterPro annotationAdd BLAST166
Domaini1046 – 1199Helicase C-terminalInterPro annotationAdd BLAST154
Domaini1640 – 1694Myb-likeInterPro annotationAdd BLAST55

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili78 – 108Sequence analysisAdd BLAST31
Coiled coili1440 – 1467Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

InParanoidiM4F0Y2.
OrthoDBiEOG093600BW.

Family and domain databases

CDDicd00079. HELICc. 1 hit.
InterProiView protein in InterPro
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR009057. Homeobox-like_sf.
IPR014012. HSA_dom.
IPR017877. Myb-like_dom.
IPR027417. P-loop_NTPase.
IPR000330. SNF2_N.
PfamiView protein in Pfam
PF00271. Helicase_C. 1 hit.
PF07529. HSA. 1 hit.
PF00176. SNF2_N. 1 hit.
SMARTiView protein in SMART
SM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
SM00573. HSA. 1 hit.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF52540. SSF52540. 3 hits.
PROSITEiView protein in PROSITE
PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
PS51204. HSA. 1 hit.
PS50090. MYB_LIKE. 1 hit.

Sequencei

Sequence statusi: Complete.

M4F0Y2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASRGGKSIP DSAMSSKGSK SRPDSDSKPK RHKTLEAPKE PRRPKTHWDH
60 70 80 90 100
VIEEMIWLSK DFESERKWKL AQAKKVALRA SKGMVDQASR EERKLKEEEQ
110 120 130 140 150
RLRKVALNIS KDVKKFWIKV EKLVLYKHQL VRNEKKKKAM DKQLEFLLGQ
160 170 180 190 200
TERYSTMLAE NLVEPYKHGH NESPKPILAI ESKSDEERAE ETPSELNACL
210 220 230 240 250
ESETLDVDED YDINPEDASE DDEDTIEEDE KHFTKQERQE ELEALQNEVD
260 270 280 290 300
LPVEELLRRY TSGRVSGETS PERDENEANL ASVGEDDIEG DKNNLTASEE
310 320 330 340 350
TEGSPSVRRS NDSFDHLAVS ETHTPDHKPG PKTASVKSGK EDQTYDFNDE
360 370 380 390 400
QEDVDFVAAT GEEKDDETTL SVEEELAKAD SVDPEDEIAL LQKESEMSIE
410 420 430 440 450
ELLARYKEDF GGKDLSEDDS SDIRQQADSD DENVESAECK PALQPCSEKD
460 470 480 490 500
EGTSNEIKED DAKDSSDKIA DAAAAARSAQ PTGFTYSTTK VRTKLPFLLK
510 520 530 540 550
HSLREYQHIG LDWLVTMYEK RLNGILADEM GLGKTIMTIA LLAHLACDKG
560 570 580 590 600
IWGPHLIVVP TSVMLNWETE FLKWCPAFKI LTYFGSAKER KLKRQGWMKL
610 620 630 640 650
NSFHVCITTY RLVIQDSKMF KRKKWKYLIL DEAHLIKNWK SQRWQTLLNF
660 670 680 690 700
NSKRRILLTG TPLQNDLMEL WSLMHFLMPH VFQSHQEFKD WFCNPIAGMV
710 720 730 740 750
EGQDKINREV IDRLHNVLRP FLLRRLKRDV EKQLPQKHEH VIFCRLSKRQ
760 770 780 790 800
RNLYEDFIAS TETQATLNSG SFFGMISIIM QLRKVCNHPD LFEGRPIVSS
810 820 830 840 850
FDMPGIDVQL SSRICSLLLK SPFSRVDLED LGFVFTHHDF SMTAWEGDEI
860 870 880 890 900
KAISTPSDLI KQRVDLKDNP EEVPLSLVNR KNLQGTSIFE EIRKAVFEER
910 920 930 940 950
VKESKDRAAA IAWWNSLRCR RKPTYSTSLR TLLTIKGPLD DIRHLKANRP
960 970 980 990 1000
SYMYSSMLAD IVLSPIERFQ KVIELVEAFT FAIPAARVPS PACWCSKSDS
1010 1020 1030 1040 1050
PIFLSPSYKE KVTDLLSPLL SPIRPAIVRR QVYFPDRRLI QFDCGKLQEL
1060 1070 1080 1090 1100
AMLLRKLKFG GHRALIFTQM TKMLDILEAF ISLYGYTYMR LDGSTPPEER
1110 1120 1130 1140 1150
QTLMQRFNTN PKIFLFILST RSGGVGINLV GADTVIFYDS DWNPAMDQQA
1160 1170 1180 1190 1200
QDRCHRIGQT REVHIYRLIS ESTIEENILK KANQKRALDN LVIQNGEYNT
1210 1220 1230 1240 1250
EFFKKLDPME LFSGHKTLTR KDEEEKSKNC EAELSLSNAD VEAALKHAED
1260 1270 1280 1290 1300
EADYMALKRV EEEEAVENQE FTEEPIERPE DDELVNEDDI KSDEPADQGV
1310 1320 1330 1340 1350
AAAGSAKEEV SLVPIDNRDE RDDIITLSQE EDNDVPDDVK QMAAAAAAAG
1360 1370 1380 1390 1400
QAISSFENQL RPIDRYAIRF LEVWDPIIVE AAIENEAGFE EKEWELDHIE
1410 1420 1430 1440 1450
KYKEEMEAEI DDGEEPLVYE KWDADFATEA YRQQVEVLTQ HQLMEDLENE
1460 1470 1480 1490 1500
AREREAAEEA ERRLALNESA HVLKPKKKKK VKKAKYKSLK KGSLGSESKQ
1510 1520 1530 1540 1550
AKTVVKVEAS SDEDNEECGY VSSSDSDMVS PRLQKRMKGK KRELVFDSDE
1560 1570 1580 1590 1600
EKNSKKKAKK HKKSLSHSDI KCKTPHDELV PSKPSDSMAV DNELKPANRG
1610 1620 1630 1640 1650
KTLGKKFIIS MPIKRVLMIK PEKLKKGNLW SRDCVPSPDS WLPQEDAVLC
1660 1670 1680 1690 1700
AMVHEYGSNW SLVSETLYGM TAGGAYRGRH RHPAYCCERY RELMQRHVLS
1710 1720 1730 1740 1750
ASDSVVNEKN LNAGSGKALL KVTEENMRAL LNIAAEQPDT EMLLQKHFTC
1760 1770 1780 1790 1800
LLSSIWRTST RSTNNQKLSL NSPIFNRQVM GSANHAQELA RKPFQGMKIT
1810 1820 1830 1840 1850
SLSSKSVESA LQDSSTSQPV DTASRSRLQE DQPINKVGLD LTLEFPRGND
1860 1870 1880 1890 1900
DSSTHFPPII KLTIDGSDSF NYVNDPPGED KLKVSRIAAE DRYRNAANAC
1910 1920 1930 1940 1950
IEDSFGWASN TFPAYDPKSR SGVKAPSLGK HKLSASDTPK SSKSKQRKLS
1960 1970 1980 1990 2000
AAEQSEVAWV RRNDPNLKFD FTPADREEEE EDKEVSEEIE MIGCPHWYDP
2010
LLTSGLDDCS LASEPSGIE
Length:2,019
Mass (Da):229,989
Last modified:May 1, 2013 - v1
Checksum:i8EC92121C57466C6
GO

Genome annotation databases

EnsemblPlantsiBra034727.1; Bra034727.1-P; Bra034727.
GrameneiBra034727.1; Bra034727.1-P; Bra034727.

Similar proteinsi

Entry informationi

Entry nameiM4F0Y2_BRARP
AccessioniPrimary (citable) accession number: M4F0Y2
Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 2013
Last sequence update: May 1, 2013
Last modified: November 22, 2017
This is version 29 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported