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Protein
Submitted name:

Cyclic nucleotide gated channel alpha 3b

Gene
N/A
Organism
Xiphophorus maculatus (Southern platyfish) (Platypoecilus maculatus)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionIon channelSAAS annotation
Biological processIon transport, Transport

Names & Taxonomyi

Protein namesi
Submitted name:
Cyclic nucleotide gated channel alpha 3bImported
OrganismiXiphophorus maculatus (Southern platyfish) (Platypoecilus maculatus)Imported
Taxonomic identifieri8083 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataOvalentariaAtherinomorphaeCyprinodontiformesPoeciliidaePoeciliinaeXiphophorus
Proteomesi
  • UP000002852 Componenti: Unassembled WGS sequence

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei203 – 222HelicalSequence analysisAdd BLAST20
Transmembranei341 – 360HelicalSequence analysisAdd BLAST20
Transmembranei413 – 436HelicalSequence analysisAdd BLAST24

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi8083.ENSXMAP00000016359.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini517 – 631Cyclic nucleotide-bindingInterPro annotationAdd BLAST115

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili120 – 147Sequence analysisAdd BLAST28
Coiled coili154 – 186Sequence analysisAdd BLAST33
Coiled coili665 – 685Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

eggNOGiKOG0500. Eukaryota.
ENOG410YWWI. LUCA.
GeneTreeiENSGT00900000140801.
InParanoidiM4APG4.
OMAiYLWANRK.
OrthoDBiEOG091G03EW.

Family and domain databases

CDDicd00038. CAP_ED. 1 hit.
Gene3Di2.60.120.10. 1 hit.
InterProiView protein in InterPro
IPR032406. CLZ_dom.
IPR018490. cNMP-bd-like.
IPR018488. cNMP-bd_CS.
IPR000595. cNMP-bd_dom.
IPR005821. Ion_trans_dom.
IPR014710. RmlC-like_jellyroll.
PfamiView protein in Pfam
PF16526. CLZ. 1 hit.
PF00027. cNMP_binding. 1 hit.
PF00520. Ion_trans. 1 hit.
SMARTiView protein in SMART
SM00100. cNMP. 1 hit.
SUPFAMiSSF51206. SSF51206. 1 hit.
PROSITEiView protein in PROSITE
PS00888. CNMP_BINDING_1. 1 hit.
PS00889. CNMP_BINDING_2. 1 hit.
PS50042. CNMP_BINDING_3. 1 hit.

Sequencei

Sequence statusi: Complete.

M4APG4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKVCSESSF SARHRPSTNT SDDELAAMEN GDSRSESRIR AHSLREDASA
60 70 80 90 100
RAWSSGSHRS PHRGGGALAR VNPIEERNDS FLERIRGPAL KDATSGESDT
110 120 130 140 150
HRKKNLSSKW PLAAYNINNC NNTDDKKEDK KDEIKKDEKK EEEKKDDKDG
160 170 180 190 200
DKKKEESKDE KKDEKKDEKK DEKKDEKKDK KDDKKKEEPP KEIWIMDPAA
210 220 230 240 250
DQYYRWLSVI AGPVFYNLIM IVTRASFNEL QSSYTKLWIV LDYTSDVIYY
260 270 280 290 300
MDTFVRSRTG YLEQGLLVKD AKKLRDKYRT TSQFKYDMIS MIPTDLLFLQ
310 320 330 340 350
YGFDNPEFRF NRLCKIQRLF EFFERTETRT SFPNMFRISN LVLYILTIIH
360 370 380 390 400
WNACVFFSIS KSIGFGSDTW VYPNISHPEY SRLARKYIYS LYWSTLTLTT
410 420 430 440 450
IGETPAPVKD VEFLFVIGDF LTGVLIFASI VGNVGAMISN MNASRAEFQA
460 470 480 490 500
KIDSIKQYMQ FRKVTRDLEA RVIKWFDYLW TEKKTCDEKE VLKSLPDKLK
510 520 530 540 550
AEIAINVHLD TLKKVRIFQD CEAGLLIELV LKLEPQVFSP GDYICKKGDI
560 570 580 590 600
GREMYIIKEG KLAVVADDGV TQFVVLSDGA YFGEISILGI KGSKAGNRRT
610 620 630 640 650
ANIRSVGYSD LFALSKDDLM EALTEYPDAK KALEEKGKAI LMKDNLIDEA
660 670 680 690 700
VANAGADPKD LEEKIVKLQD NLDGMQTKFA QLMAEFTSTQ ARLKQRVTQM
710
EGKVKSIKPE DLAEVVADK
Length:719
Mass (Da):82,335
Last modified:May 1, 2013 - v1
Checksum:iC415A9B3F73CD84C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGAJ01016925 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSXMAT00000016383; ENSXMAP00000016359; ENSXMAG00000016327.

Similar proteinsi

Entry informationi

Entry nameiM4APG4_XIPMA
AccessioniPrimary (citable) accession number: M4APG4
Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 2013
Last sequence update: May 1, 2013
Last modified: March 28, 2018
This is version 33 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported