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Protein
Submitted name:

PHD finger protein 21Ab

Gene
N/A
Organism
Xiphophorus maculatus (Southern platyfish) (Platypoecilus maculatus)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
PHD finger protein 21AbImported
OrganismiXiphophorus maculatus (Southern platyfish) (Platypoecilus maculatus)Imported
Taxonomic identifieri8083 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataOvalentariaAtherinomorphaeCyprinodontiformesPoeciliidaePoeciliinaeXiphophorus
Proteomesi
  • UP000002852 Componenti: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi8083.ENSXMAP00000006896.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini467 – 514PHD-typeInterPro annotationAdd BLAST48

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili30 – 57Sequence analysisAdd BLAST28
Coiled coili541 – 579Sequence analysisAdd BLAST39

Keywords - Domaini

Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG0383. Eukaryota.
ENOG41112YM. LUCA.
GeneTreeiENSGT00530000063984.
InParanoidiM3ZXF2.
OMAiHEDFCTV.
OrthoDBiEOG091G03CB.

Family and domain databases

Gene3Di3.30.40.10. 1 hit.
InterProiView protein in InterPro
IPR019786. Zinc_finger_PHD-type_CS.
IPR011011. Znf_FYVE_PHD.
IPR001965. Znf_PHD.
IPR019787. Znf_PHD-finger.
IPR013083. Znf_RING/FYVE/PHD.
PfamiView protein in Pfam
PF00628. PHD. 1 hit.
SMARTiView protein in SMART
SM00249. PHD. 1 hit.
SUPFAMiSSF57903. SSF57903. 1 hit.
PROSITEiView protein in PROSITE
PS01359. ZF_PHD_1. 1 hit.
PS50016. ZF_PHD_2. 1 hit.

Sequencei

Sequence statusi: Complete.

M3ZXF2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MELQTLQEAL KVEIQIHQKL VAQMKQDPQN ADLKKQLHEL QAKITALSEK
60 70 80 90 100
QKKVVEQLRK ELLVKQEPEP KLQLQVQAAP VGGDLKPTNL LQSQQITGGL
110 120 130 140 150
QQVGDCHLSA LIQLIWVNFS EQTLTVTPVL TAKTLVLKAA ATPTLPGAIL
160 170 180 190 200
SQRPPTVAMV TTAITKPDSQ SVPINLQVAS RLTNQSSEPV RLVSKNAVVL
210 220 230 240 250
QATTTSSSAQ PIRVPQFVPP PRLTPRPTFQ PQVRPRLATP TNVPIAPAPP
260 270 280 290 300
PPMMAAPQLL QRPVMLATKL ATSLPSAAPI HQVRIVNGQP CGKTGAAPLT
310 320 330 340 350
GIVITTPVTA TPTRLASPAS LPVPPPTVKL ETAEQKAAVS LPSSSTPSLS
360 370 380 390 400
PPPRPKKEEN PEKLAFMVSL GLVTHDHLEE IQSKRQERKR RTTANPVYSG
410 420 430 440 450
AVFEPERKKS AVSYLNSPLH QGTRKRGRPP KFSSVPELGS LTPTSPSSPV
460 470 480 490 500
RPLPLPSPGS GDGDIHEDFC TVCRRSGQLL MCDTCSRVYH LDCLDPPLKT
510 520 530 540 550
IPKGMWICPK CQDQILKKEE AIPWPGTLAI VHSYIAYKEA KEEEKQKLMK
560 570 580 590 600
WSSELKLERE QLEQRVKQLS NSITKCMETK NTILARQKEM QLSLDKVKHL
610
IRLIQAFNFN Q
Length:611
Mass (Da):67,088
Last modified:May 1, 2013 - v1
Checksum:i1B9E1A6D64FAD8EF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGAJ01002084 Genomic DNA. No translation available.
AGAJ01002085 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSXMAT00000006904; ENSXMAP00000006896; ENSXMAG00000006871.

Entry informationi

Entry nameiM3ZXF2_XIPMA
AccessioniPrimary (citable) accession number: M3ZXF2
Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 2013
Last sequence update: May 1, 2013
Last modified: August 30, 2017
This is version 29 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported