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Protein
Submitted name:

DEAD-box helicase 28

Gene

DDX28

Organism
Felis catus (Cat) (Felis silvestris catus)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
DEAD-box helicase 28Imported
Gene namesi
Name:DDX28Imported
OrganismiFelis catus (Cat) (Felis silvestris catus)Imported
Taxonomic identifieri9685 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCarnivoraFeliformiaFelidaeFelinaeFelis
Proteomesi
  • UP000011712 Componenti: Chromosome E2

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSFCAG00000012858.

Interactioni

Protein-protein interaction databases

STRINGi9685.ENSFCAP00000024222.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini125 – 155Q_MOTIFInterPro annotationAdd BLAST31
Domaini158 – 350Helicase ATP-bindingInterPro annotationAdd BLAST193
Domaini376 – 535Helicase C-terminalInterPro annotationAdd BLAST160

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi125 – 155Q motifPROSITE-ProRule annotationAdd BLAST31

Phylogenomic databases

eggNOGiKOG0330. Eukaryota.
ENOG410XQU7. LUCA.
GeneTreeiENSGT00730000110914.
InParanoidiM3XC68.
KOiK20096.
OMAiLHCIMPH.
OrthoDBiEOG091G06DC.

Family and domain databases

CDDicd00079. HELICc. 1 hit.
InterProiView protein in InterPro
IPR011545. DEAD/DEAH_box_helicase_dom.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
IPR014014. RNA_helicase_DEAD_Q_motif.
PfamiView protein in Pfam
PF00270. DEAD. 1 hit.
PF00271. Helicase_C. 1 hit.
SMARTiView protein in SMART
SM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
SUPFAMiSSF52540. SSF52540. 1 hit.
PROSITEiView protein in PROSITE
PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
PS51195. Q_MOTIF. 1 hit.

Sequencei

Sequence statusi: Complete.

M3XC68-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDLTRPPRMV WLASRLLLAP RRGLVVRRPD EPLPVVRIPR ALQRRQEQRQ
60 70 80 90 100
SGRSPQRLVL ARPGPLLISA RRPELNQPAR LTLGRWESAP LASRGWKNRR
110 120 130 140 150
SRRDHFSIER AQHEAPALRN LSSKSSFADL GLEPRVLRAL QEAAPEVVRP
160 170 180 190 200
TTVQSSTIPS LLRGCHILCA AETGSGKTLG YLLPLVQRLL GQPNLDSHSL
210 220 230 240 250
PAPRGLILVP SRELAEQVRA VAQPLGSSLG LQVRDLGGGH GMSRIRMQLS
260 270 280 290 300
KQPPVDVLVA TPGALWKALK SQLISLKQLS YLVLDEADTL LDESFLELMY
310 320 330 340 350
YILEKSYIAE GPADLKDPFN PKAQLVLVGA TFPEGVGQLL SKVASPDSLT
360 370 380 390 400
TITSSKLHCI MPHVRQTFMR LKGAEKVTEL VQILKQHDKV YRTGPSGTVL
410 420 430 440 450
VFCNSSSTVN WLGYILDDHK IQHLRLQGQM PASMRTGIFQ CFQKGSRDIL
460 470 480 490 500
LCTDIASRGL DSSHVDLVVN YDFPLTLQDY IHRAGRVGRV GSEVPGTVIS
510 520 530
FVTHPWDVSL VQKIELAARR RRSLPGLGSS VREPLPQQI
Length:539
Mass (Da):59,755
Last modified:May 1, 2013 - v1
Checksum:iD5DF81AFD356A2FE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AANG02020856 Genomic DNA. No translation available.
RefSeqiXP_003998197.1. XM_003998148.4.

Genome annotation databases

EnsembliENSFCAT00000012862; ENSFCAP00000024222; ENSFCAG00000012858.
GeneIDi101083471.
KEGGifca:101083471.

Similar proteinsi

Entry informationi

Entry nameiM3XC68_FELCA
AccessioniPrimary (citable) accession number: M3XC68
Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 2013
Last sequence update: May 1, 2013
Last modified: October 25, 2017
This is version 39 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported