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Protein
Submitted name:

Splicing factor 3b subunit 2

Gene

SF3B2

Organism
Felis catus (Cat) (Felis silvestris catus)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Splicing factor 3b subunit 2Imported
Gene namesi
Name:SF3B2Imported
OrganismiFelis catus (Cat) (Felis silvestris catus)Imported
Taxonomic identifieri9685 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCarnivoraFeliformiaFelidaeFelinaeFelis
Proteomesi
  • UP000011712 Componenti: Chromosome D1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSFCAG00000013289.

Interactioni

Protein-protein interaction databases

STRINGi9685.ENSFCAP00000012325.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini24 – 58SAPInterPro annotationAdd BLAST35

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili143 – 170Sequence analysisAdd BLAST28
Coiled coili276 – 302Sequence analysisAdd BLAST27
Coiled coili536 – 559Sequence analysisAdd BLAST24

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG2330. Eukaryota.
COG5182. LUCA.
GeneTreeiENSGT00390000006734.
InParanoidiM3WIL1.
OMAiMYRQFYR.
OrthoDBiEOG091G0A5N.

Family and domain databases

Gene3Di1.10.720.30. 1 hit.
1.25.10.10. 2 hits.
InterProiView protein in InterPro
IPR011989. ARM-like.
IPR007180. DUF382.
IPR006568. PSP_pro-rich.
IPR003034. SAP_dom.
PfamiView protein in Pfam
PF04037. DUF382. 1 hit.
PF04046. PSP. 1 hit.
SMARTiView protein in SMART
SM00581. PSP. 1 hit.
SM00513. SAP. 1 hit.
PROSITEiView protein in PROSITE
PS50800. SAP. 1 hit.

Sequencei

Sequence statusi: Complete.

M3WIL1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAEHPEPPK GELQLPPPPP PGHYGAWAAQ ELQAKLAEIG APIQGSREEL
60 70 80 90 100
VERLQTYTRQ TGIVLNRPVL RGEDGDKAAP PPMSAQLSGI PMPPPPMGLP
110 120 130 140 150
PLQPPPPPPP PPPGLGLGFP MAVGPRPPNL GPPPPLRVGE PVALSEEERL
160 170 180 190 200
KLAQQQAALL MQQEERAKQQ GDHSLKEHEL LEQQKRAAVL LEQERQQEIA
210 220 230 240 250
KMGTPVPRPP QDMGQIGVRT PLGPRVLTVA APVGPTPTVL PMGAPVPRPR
260 270 280 290 300
GPPPPPGDEN REMDDPSVGP KIPQALEKIL QLKESRQEEM NSQQEEEEME
310 320 330 340 350
TDTRSSLGQS ASETEEDTVS VSKKEKNRKR RNRKKKKKPQ RVRGASSESS
360 370 380 390 400
GDREKESTRS RGSDSPAADV EIEYVTEEPE IYEPNFIFFK RIFEAFKLTD
410 420 430 440 450
DVKKEKEKEP EKLDKLENSA APKKKGFEEE HKDSDDDSSD DEQEKKPEAP
460 470 480 490 500
KLSKKKLRRM NRFTVAELKQ LVARPDVVEM HDVTAQDPKL LVHLKATRNS
510 520 530 540 550
VPVPRHWCFK RKYLQGKRGI EKPPFELPDF IKRTGIQEMR EALQEKEEQK
560 570 580 590 600
TMKSKMREKV RPKMGKIDID YQKLHDAFFK WQTKPKLTIH GDLYYEGKEF
610 620 630 640 650
ETRLKEKKPG DLSDELRISL GMPVGPNAHK VPPPWLIAMQ RYGPPPSYPN
660 670 680 690 700
LKIPGLNSPI PESCSFGYHA GGWGKPPVDE TGKPLYGDVF GTNAAEFQTK
710 720 730 740 750
TEEEEIDRTP WGELEPSDEE SSEEEEEEES DEDKPDETGF ITPADSGLIT
760 770 780 790 800
PGGFSSVPAG METPELIELR KKKIEEAMDG SETPQLFTVL PEKRTATVGG
810 820 830 840 850
AMMGSTHIYD MSTVMSRKGP APELQGVEVA LAPEELELDP MAMTQKYEEH
860 870 880 890
VREQQAQVEK EDFSDMVAEH AAKQKQKKRK AQPQDSRGGS KKYKEFKF
Length:898
Mass (Da):100,527
Last modified:May 1, 2013 - v1
Checksum:iD1792437B3E2C1D0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AANG02012345 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSFCAT00000013293; ENSFCAP00000012325; ENSFCAG00000013289.

Similar proteinsi

Entry informationi

Entry nameiM3WIL1_FELCA
AccessioniPrimary (citable) accession number: M3WIL1
Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 2013
Last sequence update: May 1, 2013
Last modified: August 30, 2017
This is version 28 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported