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Protein
Submitted name:

Sorting nexin 1

Gene

SNX1

Organism
Felis catus (Cat) (Felis silvestris catus)
Status
Unreviewed-Annotation score: Annotation score: 3 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Sorting nexin 1Imported
Gene namesi
Name:SNX1Imported
OrganismiFelis catus (Cat) (Felis silvestris catus)Imported
Taxonomic identifieri9685 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCarnivoraFeliformiaFelidaeFelinaeFelis
Proteomesi
  • UP000011712 Componenti: Chromosome B3

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSFCAG00000004179.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi9685.ENSFCAP00000003849.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini142 – 271PXInterPro annotationAdd BLAST130

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili362 – 382Sequence analysisAdd BLAST21
Coiled coili445 – 465Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG2273. Eukaryota.
COG5391. LUCA.
GeneTreeiENSGT00900000140874.
InParanoidiM3W1Q3.
KOiK17917.
OMAiNIPKFKR.
OrthoDBiEOG091G06FB.

Family and domain databases

CDDicd07281. PX_SNX1. 1 hit.
Gene3Di1.20.1270.60. 1 hit.
3.30.1520.10. 1 hit.
InterProiView protein in InterPro
IPR027267. AH/BAR_dom_sf.
IPR001683. Phox.
IPR036871. PX_dom_sf.
IPR034901. PX_SNX1.
IPR028660. SNX1.
IPR005329. Sorting_nexin_N.
IPR015404. Vps5_C.
PANTHERiPTHR10555:SF129. PTHR10555:SF129. 1 hit.
PfamiView protein in Pfam
PF00787. PX. 1 hit.
PF03700. Sorting_nexin. 1 hit.
PF09325. Vps5. 1 hit.
SMARTiView protein in SMART
SM00312. PX. 1 hit.
SUPFAMiSSF103657. SSF103657. 1 hit.
SSF64268. SSF64268. 1 hit.
PROSITEiView protein in PROSITE
PS50195. PX. 1 hit.

Sequencei

Sequence statusi: Complete.

M3W1Q3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASGGGGCSA SERFPPPFPG LEPESEGAAG GSEPEAGDSD TEGEDIFTGA
60 70 80 90 100
AAASKPQSPK RVASLPINNG SKENGIHEEQ DQEPQDLFAD ATVELSLDST
110 120 130 140 150
QNNQKKVPAK ALISLPPQEA TNSSKPQTSY EELEEEEQED QFDLTVGITD
160 170 180 190 200
PEKIGDGMNA YVAYKVTTQT SLPMFRSKQF AVKRRFSDFL GLYEKLSEKH
210 220 230 240 250
SQNGFIVPPP PEKSLIGMTK VKVGKEDSSS AEFLEKRRAA LERYLQRIVN
260 270 280 290 300
HPTMLQDPDV REFLEKEELP RAVGTQTLSG AGLLKMFNKA TDAVSKMTIK
310 320 330 340 350
MNESDIWFEE KLQEVECEEQ RLRKLHAVVE TLVNHRKELA LNTAQFAKSL
360 370 380 390 400
AMLGSSEDNT ALSRALSQLA EVEEKIEQLH QEQANNDFFL LAELLSDYIR
410 420 430 440 450
LLAIVRAAFD QRMKTWQRWQ DAQATLQKKR EAEARLLWAN KPDKLQQAKD
460 470 480 490 500
EILEWESRVT QYERDFERIS TVVRKEVIRF EKEKSKDFKN HVIKYLETLL
510 520
YSQQQLAKYW EAFLPEAKAI S
Length:521
Mass (Da):58,867
Last modified:May 1, 2013 - v1
Checksum:iDB259C4EC94087B8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AANG02118046 Genomic DNA. No translation available.
AANG02118047 Genomic DNA. No translation available.
AANG02118048 Genomic DNA. No translation available.
AANG02118049 Genomic DNA. No translation available.
RefSeqiXP_003987098.1. XM_003987049.4.

Genome annotation databases

EnsembliENSFCAT00000004180; ENSFCAP00000003849; ENSFCAG00000004179.
GeneIDi101088845.
KEGGifca:101088845.

Similar proteinsi

Entry informationi

Entry nameiM3W1Q3_FELCA
AccessioniPrimary (citable) accession number: M3W1Q3
Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 2013
Last sequence update: May 1, 2013
Last modified: December 20, 2017
This is version 44 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported