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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

RE6C_01376

Organism
Rhodopirellula europaea 6C
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
ORF Names:RE6C_01376Imported
OrganismiRhodopirellula europaea 6CImported
Taxonomic identifieri1263867 [NCBI]
Taxonomic lineageiBacteriaPlanctomycetesPlanctomycetiaPlanctomycetalesPlanctomycetaceaeRhodopirellula
Proteomesi
  • UP000011529 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini326 – 456DNA_LIGASE_A3InterPro annotationAdd BLAST131

Family and domain databases

Gene3Di1.10.3260.10. 1 hit.
InterProiView protein in InterPro
IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR036599. DNA_ligase_N_sf.
IPR012340. NA-bd_OB-fold.
PfamiView protein in Pfam
PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiView protein in PROSITE
PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.

Sequencei

Sequence statusi: Complete.

M2ALC5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKLFAELFQR LDQTTKTNEK VAAIAQYMSA ASPEDAAWAI ASLAGRRVKR
60 70 80 90 100
LVSTGLLRGL AAESAGIPDW LFEESYDSVG DLAETISLLV PAGNSSDADF
110 120 130 140 150
RSLSDWMQND VLPLARMDES EQSDAVRQMW AQTEGTSRLI LMKLITGSFR
160 170 180 190 200
VGVSSRLVAR GIAESNGLPA DVIAHRLMGD WDPTPEFIER LHSTDLNDAT
210 220 230 240 250
HSRPYPFCLA HALADDANAE GDGPDWQILG DPSEYQSEWK WDGIRGQVIR
260 270 280 290 300
RAGRTYIWSR GEDLMVNRWP EIERAAEFLP DGTVIDGEIL ASRLISPASD
310 320 330 340 350
DSEQAIEVLP FAQLQRRIGR KTVGKKLLTE VPVMFHAFDC LELDGNDLRA
360 370 380 390 400
KPLADRRDAL LKMLSIHQPP SVVWNEPLSF ESWDDLAAIR STSRDVLAEG
410 420 430 440 450
VMIKRLDAPY SVGRVRGVWW KWKLAPHTVD AVLIYAQRGH GKRASLYTDY
460 470 480 490 500
TFAVWDEDKL VPFAKAYSGL TDAEIRKVDR FVRDNTSERF GPVRSVKPEL
510 520 530 540 550
VMELAFEGLQ RSTRHKSGIA TRFPRIVRWR TDKQPADADR LADLIAMLPE
560
AESKVIANGS EGGG
Length:564
Mass (Da):62,958
Last modified:May 1, 2013 - v1
Checksum:iB220937406F52D12
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ANMO01000080 Genomic DNA. Translation: EMB17915.1.
RefSeqiWP_008655012.1. NZ_ANMO01000080.1.

Genome annotation databases

EnsemblBacteriaiEMB17915; EMB17915; RE6C_01376.
PATRICifig|1263867.3.peg.1455.

Similar proteinsi

Entry informationi

Entry nameiM2ALC5_9PLAN
AccessioniPrimary (citable) accession number: M2ALC5
Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 2013
Last sequence update: May 1, 2013
Last modified: October 25, 2017
This is version 14 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteomeImported