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M1XDJ5 (M1XDJ5_BACAM) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 10. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length194 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + thymidine = ADP + thymidine 5'-phosphate. SAAS SAAS020634 HAMAP-Rule MF_00124

Subunit structure

Homotetramer By similarity. SAAS SAAS020633 HAMAP-Rule MF_00124

Subcellular location

Cytoplasm By similarity SAAS SAAS020633 HAMAP-Rule MF_00124.

Sequence similarities

Belongs to the thymidine kinase family. RuleBase RU004165 HAMAP-Rule MF_00124

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding15 – 228ATP By similarity HAMAP-Rule MF_00124
Nucleotide binding88 – 914ATP By similarity HAMAP-Rule MF_00124

Sites

Active site891Proton acceptor By similarity HAMAP-Rule MF_00124
Metal binding1451Zinc By similarity HAMAP-Rule MF_00124
Metal binding1481Zinc By similarity HAMAP-Rule MF_00124
Metal binding1831Zinc By similarity HAMAP-Rule MF_00124
Metal binding1861Zinc By similarity HAMAP-Rule MF_00124

Sequences

Sequence LengthMass (Da)Tools
M1XDJ5 [UniParc].

Last modified May 1, 2013. Version 1.
Checksum: 42DC891C392B71BC

FASTA19421,303
        10         20         30         40         50         60 
MYIMKQSGWL ELICGSMFSG KSEELIRRVK RATYAKQEVK VFKPAIDNRY SEEAVVSHNG 

        70         80         90        100        110        120 
TSMTSHVISS SAEIWDHISE STDVIAVDEV QFFGESIIGD LSSLADKGYR VIAAGLDMDF 

       130        140        150        160        170        180 
RGEPFGVVPN LMAVAESVTK LQAVCSVCGS PASRTQRLID GKPASYDDPV ILVGASESYE 

       190 
ARCRHHHEVP KKTD 

« Hide

References

[1]"Bacillus amyloliquefaciens strain UCMB5036: The genome sequence of a plant associated bacterium."
Manzoor S., Niazi A., Bejai S., Meijer J., Bongcam-Rudloff E.
Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: UCMB5036 EMBL CCP23360.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
HF563562 Genomic DNA. Translation: CCP23360.1.
RefSeqYP_007499013.1. NC_020410.1.

3D structure databases

ProteinModelPortalM1XDJ5.
SMRM1XDJ5. Positions 1-190.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCCP23360; CCP23360; BAM5036_3352.
GeneID14664788.
KEGGbaml:BAM5036_3352.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00857.

Family and domain databases

HAMAPMF_00124. Thymidine_kinase.
InterProIPR027417. P-loop_NTPase.
IPR001267. Thymidine_kinase.
IPR020633. Thymidine_kinase_CS.
IPR020634. Thymidine_kinase_subgr.
[Graphical view]
PANTHERPTHR11441. PTHR11441. 1 hit.
PfamPF00265. TK. 1 hit.
[Graphical view]
PIRSFPIRSF035805. TK_cell. 1 hit.
SUPFAMSSF52540. SSF52540. 1 hit.
PROSITEPS00603. TK_CELLULAR_TYPE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameM1XDJ5_BACAM
AccessionPrimary (citable) accession number: M1XDJ5
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2013
Last sequence update: May 1, 2013
Last modified: April 16, 2014
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)