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Protein
Submitted name:

2,5-dioxovalerate dehydrogenase YcbD

Gene

ycbD

Organism
Bacillus subtilis subsp. subtilis 6051-HGW
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. 2,5-dioxovalerate dehydrogenase (NADP+) activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationImported

Names & Taxonomyi

Protein namesi
Submitted name:
2,5-dioxovalerate dehydrogenase YcbDImported (EC:1.2.1.26Imported)
Gene namesi
Name:ycbDImported
ORF Names:BSU6051_02470Imported
OrganismiBacillus subtilis subsp. subtilis 6051-HGWImported
Taxonomic identifieri1147161 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000011759: Chromosome

Structurei

3D structure databases

ProteinModelPortaliM1U4Z2.
SMRiM1U4Z2. Positions 7-487.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the aldehyde dehydrogenase family.UniRule annotation

Phylogenomic databases

KOiK00128.

Family and domain databases

Gene3Di3.40.309.10. 1 hit.
3.40.605.10. 1 hit.
InterProiIPR016161. Ald_DH/histidinol_DH.
IPR016163. Ald_DH_C.
IPR016160. Ald_DH_CS_CYS.
IPR029510. Ald_DH_CS_GLU.
IPR016162. Ald_DH_N.
IPR015590. Aldehyde_DH_dom.
[Graphical view]
PfamiPF00171. Aldedh. 1 hit.
[Graphical view]
SUPFAMiSSF53720. SSF53720. 1 hit.
PROSITEiPS00070. ALDEHYDE_DEHYDR_CYS. 1 hit.
PS00687. ALDEHYDE_DEHYDR_GLU. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

M1U4Z2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSVITEQNTY LNFINGEWVK SQSGDMVKVE NPADVNDIVG YVQNSTAEDV
60 70 80 90 100
ERAVTAANEA KTAWRKLTGA ERGQYLYKTA DIMEQRLEEI AACATREMGK
110 120 130 140 150
TLPEAKGETA RGIAILRYYA GEGMRKTGDV IPSTDKDALM FTTRVPLGVV
160 170 180 190 200
GVISPWNFPV AIPIWKMAPA LVYGNTVVIK PATETAVTCA KIIACFEEAG
210 220 230 240 250
LPAGVINLVT GPGSVVGQGL AEHDGVNAVT FTGSNQVGKI IGQAALARGA
260 270 280 290 300
KYQLEMGGKN PVIVADDADL EAAAEAVITG AFRSTGQKCT ATSRVIVQSG
310 320 330 340 350
IYERFKEKLL QRTKDITIGD SLKEDVWMGP IASKNQLDNC LSYIEKGKQE
360 370 380 390 400
GASLLIGGEK LENGKYQNGY YVQPAIFDNV TSEMTIAQEE IFGPVIALIK
410 420 430 440 450
VDSIEEALNI ANDVKFGLSA SIFTENIGRM LSFIDEIDAG LVRINAESAG
460 470 480
VELQAPFGGM KQSSSHSREQ GEAAKDFFTA IKTVFVKP
Length:488
Mass (Da):52,415
Last modified:May 1, 2013 - v1
Checksum:i9C37B32EF51D59B2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003329 Genomic DNA. Translation: AGG59589.1.
RefSeqiYP_007532172.1. NC_020507.1.

Genome annotation databases

EnsemblBacteriaiAGG59589; AGG59589; BSU6051_02470.
GeneIDi14767795.
KEGGibsh:BSU6051_02470.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003329 Genomic DNA. Translation: AGG59589.1.
RefSeqiYP_007532172.1. NC_020507.1.

3D structure databases

ProteinModelPortaliM1U4Z2.
SMRiM1U4Z2. Positions 7-487.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAGG59589; AGG59589; BSU6051_02470.
GeneIDi14767795.
KEGGibsh:BSU6051_02470.

Phylogenomic databases

KOiK00128.

Family and domain databases

Gene3Di3.40.309.10. 1 hit.
3.40.605.10. 1 hit.
InterProiIPR016161. Ald_DH/histidinol_DH.
IPR016163. Ald_DH_C.
IPR016160. Ald_DH_CS_CYS.
IPR029510. Ald_DH_CS_GLU.
IPR016162. Ald_DH_N.
IPR015590. Aldehyde_DH_dom.
[Graphical view]
PfamiPF00171. Aldedh. 1 hit.
[Graphical view]
SUPFAMiSSF53720. SSF53720. 1 hit.
PROSITEiPS00070. ALDEHYDE_DEHYDR_CYS. 1 hit.
PS00687. ALDEHYDE_DEHYDR_GLU. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Characterization and optimization of Bacillus subtilis ATCC 6051 as an expression host."
    Kabisch J., Thurmer A., Hubel T., Popper L., Daniel R., Schweder T.
    J. Biotechnol. 163:97-104(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 6051-HGWImported.

Entry informationi

Entry nameiM1U4Z2_BACIU
AccessioniPrimary (citable) accession number: M1U4Z2
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2013
Last sequence update: May 1, 2013
Last modified: January 7, 2015
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.