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M1PDD6 (M1PDD6_METMZ) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 9. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Phosphoenolpyruvate carboxylase HAMAP-Rule MF_01904

Short name=PEPC HAMAP-Rule MF_01904
Short name=PEPCase HAMAP-Rule MF_01904
EC=4.1.1.31 HAMAP-Rule MF_01904
Gene names
Name:ppcA HAMAP-Rule MF_01904
ORF Names:MmTuc01_3308 EMBL AGF98562.1
OrganismMethanosarcina mazei Tuc01 [Complete proteome] EMBL AGF98562.1
Taxonomic identifier1236903 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaMethanomicrobiaMethanosarcinalesMethanosarcinaceaeMethanosarcina

Protein attributes

Sequence length526 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the irreversible beta-carboxylation of phosphoenolpyruvate (PEP) to form oxaloacetate (OAA), a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle By similarity. HAMAP-Rule MF_01904

Catalytic activity

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-. HAMAP-Rule MF_01904

Cofactor

Magnesium By similarity. HAMAP-Rule MF_01904

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_01904

Sequence similarities

Belongs to the PEPCase type 2 family. HAMAP-Rule MF_01904

Sequences

Sequence LengthMass (Da)Tools
M1PDD6 [UniParc].

Last modified May 1, 2013. Version 1.
Checksum: 4F1FA9A95A18BE45

FASTA52658,122
        10         20         30         40         50         60 
MSKKATYPKV MCTQHPDSAS KYISTQEEPG EAIEAAVVFG CDEYMPDYEG KATPYHQNVQ 

        70         80         90        100        110        120 
IVSRFIEETD LIPGKDIFIT PRAPSAAQEN RFRQLMVMMS IAEANHGALE YSDVQAINEF 

       130        140        150        160        170        180 
VHPMTGTVGE ILDAQQHMVD VGELAKKEFG VAMEVPRIIP LIEDAPALLH AKELAENTLL 

       190        200        210        220        230        240 
SWEKRFGAAP EKFRVFLGKS DSALSFGHVA STLSCKYAIS GISELDSELD TSTGIIFGAG 

       250        260        270        280        290        300 
TLPFRGHLSL KNAENFFREY RGIGTITLQS ALRYSHDKGE AEALVRLAEE RLPESPDIYS 

       310        320        330        340        350        360 
GEEKEEIVNL IGIFGARYNR IIREMSCTIN QLAGLLPQQR DRLMHKGTGG YSRNVPDISG 

       370        380        390        400        410        420 
LVCLCRNDVG KELSASMPAE DLNLPRAIKF TGALYSIGLP PEFIGTGTAL EEAREKLGEE 

       430        440        450        460        470        480 
ACERLLKKYF PSLGSDLSFA SGYLDLNVAS RFLPEACLKE IRKDIEVLRD TFSLKVQPEP 

       490        500        510        520 
SYRILLEMMQ PDLLQAGTKG NCMDEEVSQL VCSTLTKMGK IRKALG 

« Hide

References

[1]"Complete Genome of a Methanosarcina mazei Strain Isolated from Sediment Samples from an Amazonian Flooded Area."
Assis das Gracas D., Thiago Juca Ramos R., Vieira Araujo A.C., Zahlouth R., Ribeiro Carneiro A., Souza Lopes T., Azevedo Barauna R., Azevedo V., Cruz Schneider M.P., Pellizari V.H., Silva A.
Genome Announc. 1:E00271-13(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Tuc01 EMBL AGF98562.1.
[2]Rede Paraense de Genomica e Proteomica
das Gracas D.A., Ramos R., Zahlouth R., Ranieri A., Lima J., Lopes T.S., Barauna R.A., Carneiro A.R., Araujo A.C.V., Schneider M.P.C., Pellizari V.H., Silva A.
Submitted (FEB-2013) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Tuc01 EMBL AGF98562.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP004144 Genomic DNA. Translation: AGF98562.1.
RefSeqYP_007491834.1. NC_020389.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGF98562; AGF98562; MmTuc01_3308.
GeneID14656651.
KEGGmmaz:MmTuc01_3308.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01595.

Family and domain databases

HAMAPMF_01904. PEPcase_type2.
InterProIPR007566. PEP_COase_arc-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamPF14010. PEPcase_2. 1 hit.
[Graphical view]
PIRSFPIRSF006677. UCP006677. 1 hit.
SUPFAMSSF51621. SSF51621. 1 hit.
TIGRFAMsTIGR02751. PEPCase_arch. 1 hit.
ProtoNetSearch...

Entry information

Entry nameM1PDD6_METMZ
AccessionPrimary (citable) accession number: M1PDD6
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2013
Last sequence update: May 1, 2013
Last modified: February 19, 2014
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)