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Protein
Submitted name:

Nitrate transport protein NrtB

Gene

nrtB

Organism
Synechocystis sp. PCC 6803
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. nitrate transmembrane transporter activity Source: InterPro
Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Nitrate transport protein NrtBImported
Gene namesi
Name:nrtBImported
ORF Names:MYO_19240Imported
OrganismiSynechocystis sp. PCC 6803Imported
Taxonomic identifieri1148 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
ProteomesiUP000011627: Chromosome

Subcellular locationi

Membrane UniRule annotation; Multi-pass membrane protein UniRule annotation

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PRIDEiM1LF62.

Structurei

3D structure databases

ProteinModelPortaliM1LF62.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the binding-protein-dependent transport system permease family.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSAAS annotation

Phylogenomic databases

KOiK15577.

Family and domain databases

Gene3Di1.10.3720.10. 1 hit.
InterProiIPR000515. MetI-like.
IPR005889. NtrB.
[Graphical view]
PfamiPF00528. BPD_transp_1. 1 hit.
[Graphical view]
SUPFAMiSSF161098. SSF161098. 1 hit.
TIGRFAMsiTIGR01183. ntrB. 1 hit.
PROSITEiPS50928. ABC_TM1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

M1LF62-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MASSTAGLRP RRKKNPLSFI YSPKVIRPAV AIAVLLVVWQ ILCSGEGSNL
60 70 80 90 100
PSPVQVLEQT YPLILNPFFD NGGTDKGLGI QIFASLTRVA VGFSAAAVVG
110 120 130 140 150
IALGILIGSS KFMYDALDPI FQVLRTIPPL AWLPIALAAL QEAEPSAIFV
160 170 180 190 200
IFITAIWPIV INTTVGAQQV PQDYRNVSRV LKLSKSQYFF NILFPAAVPY
210 220 230 240 250
IFTGLRIGIG LSWLAIVAAE MLIGGVGIGF FIWDAYNSSL ISEIIIALIY
260 270
VGIVGLLLDR FIAFLESLVV PAEQK
Length:275
Mass (Da):29,720
Last modified:May 1, 2013 - v1
Checksum:i47CDB9366185F99E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003265 Genomic DNA. Translation: AGF51180.1.
RefSeqiNP_440811.1. NC_000911.1.
WP_010872121.1. NC_020286.1.
YP_005650870.1. NC_017277.1.
YP_007450694.1. NC_020286.1.

Genome annotation databases

EnsemblBacteriaiAGF51180; AGF51180; MYO_19240.
GeneIDi954114.
KEGGisyn:sll1451.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003265 Genomic DNA. Translation: AGF51180.1.
RefSeqiNP_440811.1. NC_000911.1.
WP_010872121.1. NC_020286.1.
YP_005650870.1. NC_017277.1.
YP_007450694.1. NC_020286.1.

3D structure databases

ProteinModelPortaliM1LF62.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiM1LF62.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAGF51180; AGF51180; MYO_19240.
GeneIDi954114.
KEGGisyn:sll1451.

Phylogenomic databases

KOiK15577.

Family and domain databases

Gene3Di1.10.3720.10. 1 hit.
InterProiIPR000515. MetI-like.
IPR005889. NtrB.
[Graphical view]
PfamiPF00528. BPD_transp_1. 1 hit.
[Graphical view]
SUPFAMiSSF161098. SSF161098. 1 hit.
TIGRFAMsiTIGR01183. ntrB. 1 hit.
PROSITEiPS50928. ABC_TM1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Microevolution in cyanobacteria: re-sequencing a motile substrain of Synechocystis sp. PCC 6803."
    Trautmann D., Voss B., Wilde A., Al-Babili S., Hess W.R.
    DNA Res. 19:435-448(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 6803Imported.

Entry informationi

Entry nameiM1LF62_9SYNC
AccessioniPrimary (citable) accession number: M1LF62
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2013
Last sequence update: May 1, 2013
Last modified: January 7, 2015
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.