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M1L6E5 (M1L6E5_BACAM) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 8. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Alpha-amylase RuleBase RU361134

EC=3.2.1.1 RuleBase RU361134
Gene names
ORF Names:KSO_018020 EMBL AGF29087.1
OrganismBacillus amyloliquefaciens IT-45 [Complete proteome] EMBL AGF29087.1
Taxonomic identifier1091041 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus

Protein attributes

Sequence length659 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units. RuleBase RU361134

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Keywords
   Biological processCarbohydrate metabolism RuleBase RU361134
   Molecular functionGlycosidase RuleBase RU361134
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
M1L6E5 [UniParc].

Last modified May 1, 2013. Version 1.
Checksum: 212D76F1E1F4FA94

FASTA65972,276
        10         20         30         40         50         60 
MFEKRFKTSL LPLSAGFLLL FHLVLSGPAA ANAETANKSN EVAASSVKNG TILHAWNWSF 

        70         80         90        100        110        120 
NTLTQNMKEI RDAGYAAIQT SPINQVKEGN QGDKSMRNWY WLYQPTSYQI GNRYLGTEQE 

       130        140        150        160        170        180 
FKDMCAAAEK YGVKVIVDAV INHTTSDYAA ISDEIKRIPN WTHGNTQIKN WSDRWDVTQN 

       190        200        210        220        230        240 
SLLGLYDWNT QNTEVQTYLK RFLERALNDG ADGFRYDAAK HIELPDDGNY GSRFWPNITN 

       250        260        270        280        290        300 
TSAEFQYGEI LQDSASRDTA YANYMNVTAS NYGHSIRSAL KNRNLSVSNI SHYASDVSAD 

       310        320        330        340        350        360 
KLVTWVESHD TYANDEEEST WMSDDDIRLG WAVIGSRSGS TPLFFSRPEG GGNGVRFPGK 

       370        380        390        400        410        420 
SQIGDRGSAL FKDQAITAVN QFHNVMAGQP EELSNPNGNN QILMNQRGSK GVVLANAGSS 

       430        440        450        460        470        480 
SVTVNTSTKL PDGRYDNRAG AGSFQVANGK LTGTINARSA AVLYSDDIGN APQVFLENYQ 

       490        500        510        520        530        540 
TGAVHSFNDQ LTVTLRANAK TAKAVYQINN GQQTAFKDGD RLTIGKGDPI GTTYNIRLTG 

       550        560        570        580        590        600 
TNGEGAERTQ EYTFVKKDPA QTNIIGYQNP DHWGQVNAYI YKHDGGGAIE LTGSWPGKAM 

       610        620        630        640        650 
TKNANGIYTL TLPANADTAN AKVIFNNGSA QVPGQNQPGF DYVQNGLYNN SGLNGYLPH 

« Hide

References

[1]"Completed Genome Sequence of Bacillus amyloliquefaciens IT45, a commercial strain used in horticulture."
Tompkins T.A., Barreau G., Mathieu O.
Submitted (JAN-2013) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: IT-45 EMBL AGF29087.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP004065 Genomic DNA. Translation: AGF29087.1.
RefSeqYP_007446968.1. NC_020272.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGF29087; AGF29087; KSO_018020.
GeneID14580424.
KEGGbami:KSO_018020.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00632. Aamy_C. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameM1L6E5_BACAM
AccessionPrimary (citable) accession number: M1L6E5
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2013
Last sequence update: May 1, 2013
Last modified: July 9, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)