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M1KS49

- M1KS49_BACAM

UniProt

M1KS49 - M1KS49_BACAM

Protein

Xylose isomerase

Gene

xylA

Organism
Bacillus amyloliquefaciens IT-45
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 13 (01 Oct 2014)
      Sequence version 1 (01 May 2013)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    D-xylopyranose = D-xylulose.UniRule annotationSAAS annotation

    Cofactori

    Binds 2 magnesium ions per subunit.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei107 – 1071UniRule annotation
    Active sitei110 – 1101UniRule annotation
    Metal bindingi238 – 2381Magnesium 1UniRule annotation
    Metal bindingi274 – 2741Magnesium 1UniRule annotation
    Metal bindingi274 – 2741Magnesium 2UniRule annotation
    Metal bindingi277 – 2771Magnesium 2UniRule annotation
    Metal bindingi302 – 3021Magnesium 1UniRule annotation
    Metal bindingi313 – 3131Magnesium 2UniRule annotation
    Metal bindingi315 – 3151Magnesium 2UniRule annotation
    Metal bindingi345 – 3451Magnesium 1UniRule annotation

    GO - Molecular functioni

    1. magnesium ion binding Source: UniProtKB-HAMAP
    2. xylose isomerase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. D-xylose metabolic process Source: UniProtKB-HAMAP
    2. pentose-phosphate shunt Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    IsomeraseUniRule annotationSAAS annotationImported

    Keywords - Biological processi

    Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotation, Xylose metabolismUniRule annotationSAAS annotation

    Keywords - Ligandi

    MagnesiumUniRule annotationSAAS annotation, Metal-bindingUniRule annotationSAAS annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
    Gene namesi
    Name:xylAUniRule annotation
    ORF Names:KSO_010675Imported
    OrganismiBacillus amyloliquefaciens IT-45Imported
    Taxonomic identifieri1091041 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
    ProteomesiUP000006456: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotationSAAS annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    CytoplasmUniRule annotationSAAS annotation

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotationSAAS annotation

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the xylose isomerase family.UniRule annotation

    Phylogenomic databases

    KOiK01805.

    Family and domain databases

    Gene3Di3.20.20.150. 1 hit.
    HAMAPiMF_00455. Xylose_isom_A.
    InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
    IPR013452. Xylose_isom_bac.
    IPR001998. Xylose_isomerase.
    [Graphical view]
    PfamiPF01261. AP_endonuc_2. 1 hit.
    [Graphical view]
    PRINTSiPR00688. XYLOSISMRASE.
    SUPFAMiSSF51658. SSF51658. 1 hit.
    TIGRFAMsiTIGR02630. xylose_isom_A. 1 hit.
    PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    M1KS49-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAHSHSGSVN YFESVNKVIY EGKESTNPLA FKYYNSQEVI GGKTMKEHLR    50
    FSIAYWHTFT ADGTDMFGAA TMQRPWDHYK GMDLARARVE AAFELFEKLD 100
    APFFAFHDRD IAPEGSTLKE TNQNLDIILD MIKDYMRTSG VKLLWNTANM 150
    FTNPRFVHGA ATSCNADVFA YAAAQVKKGL ETAKELGAEN YVFWGGREGY 200
    ETLLNTDLKF ELDNMARFMH MAVDYAKEIG YIGQFLIEPK PKEPTTHQYD 250
    TDAATTIAFL KQYGLDNHFK LNLEANHATL AGHTFEHELR MARVHGLLGS 300
    VDANQGDPLL GWDTDEFPTD LYSATLAMYE ILQNGGLGSG GLNFDAKVRR 350
    SSFEPDDLLY AHVAGMDTFA RGLKAAHKLI EDRVFEDVIQ HRYRSFTEGI 400
    GLEIAEGRAD FKTLEQYALN NQPIKNESGR QERLKAILNQ YILQV 445
    Length:445
    Mass (Da):50,304
    Last modified:May 1, 2013 - v1
    Checksum:iF1E9521D363E60EC
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP004065 Genomic DNA. Translation: AGF27626.1.
    RefSeqiWP_015388196.1. NC_020272.1.
    YP_007445507.1. NC_020272.1.

    Genome annotation databases

    EnsemblBacteriaiAGF27626; AGF27626; KSO_010675.
    GeneIDi14578963.
    KEGGibami:KSO_010675.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP004065 Genomic DNA. Translation: AGF27626.1 .
    RefSeqi WP_015388196.1. NC_020272.1.
    YP_007445507.1. NC_020272.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AGF27626 ; AGF27626 ; KSO_010675 .
    GeneIDi 14578963.
    KEGGi bami:KSO_010675.

    Phylogenomic databases

    KOi K01805.

    Family and domain databases

    Gene3Di 3.20.20.150. 1 hit.
    HAMAPi MF_00455. Xylose_isom_A.
    InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
    IPR013452. Xylose_isom_bac.
    IPR001998. Xylose_isomerase.
    [Graphical view ]
    Pfami PF01261. AP_endonuc_2. 1 hit.
    [Graphical view ]
    PRINTSi PR00688. XYLOSISMRASE.
    SUPFAMi SSF51658. SSF51658. 1 hit.
    TIGRFAMsi TIGR02630. xylose_isom_A. 1 hit.
    PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Completed Genome Sequence of Bacillus amyloliquefaciens IT45, a commercial strain used in horticulture."
      Tompkins T.A., Barreau G., Mathieu O.
      Submitted (JAN-2013) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: IT-45Imported.

    Entry informationi

    Entry nameiM1KS49_BACAM
    AccessioniPrimary (citable) accession number: M1KS49
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 1, 2013
    Last sequence update: May 1, 2013
    Last modified: October 1, 2014
    This is version 13 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3