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M1KS49 (M1KS49_BACAM) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length445 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

D-xylopyranose = D-xylulose. RuleBase RU000609 HAMAP-Rule MF_00455 SAAS SAAS001998

Cofactor

Binds 2 magnesium ions per subunit By similarity. HAMAP-Rule MF_00455

Subunit structure

Homotetramer By similarity. RuleBase RU000610 HAMAP-Rule MF_00455 SAAS SAAS001998

Subcellular location

Cytoplasm By similarity RuleBase RU000610 HAMAP-Rule MF_00455 SAAS SAAS001998.

Sequence similarities

Belongs to the xylose isomerase family. RuleBase RU000609 HAMAP-Rule MF_00455

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1071 By similarity HAMAP-Rule MF_00455
Active site1101 By similarity HAMAP-Rule MF_00455
Metal binding2381Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2741Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2741Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding2771Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding3021Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding3131Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding3151Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding3451Magnesium 1 By similarity HAMAP-Rule MF_00455

Sequences

Sequence LengthMass (Da)Tools
M1KS49 [UniParc].

Last modified May 1, 2013. Version 1.
Checksum: F1E9521D363E60EC

FASTA44550,304
        10         20         30         40         50         60 
MAHSHSGSVN YFESVNKVIY EGKESTNPLA FKYYNSQEVI GGKTMKEHLR FSIAYWHTFT 

        70         80         90        100        110        120 
ADGTDMFGAA TMQRPWDHYK GMDLARARVE AAFELFEKLD APFFAFHDRD IAPEGSTLKE 

       130        140        150        160        170        180 
TNQNLDIILD MIKDYMRTSG VKLLWNTANM FTNPRFVHGA ATSCNADVFA YAAAQVKKGL 

       190        200        210        220        230        240 
ETAKELGAEN YVFWGGREGY ETLLNTDLKF ELDNMARFMH MAVDYAKEIG YIGQFLIEPK 

       250        260        270        280        290        300 
PKEPTTHQYD TDAATTIAFL KQYGLDNHFK LNLEANHATL AGHTFEHELR MARVHGLLGS 

       310        320        330        340        350        360 
VDANQGDPLL GWDTDEFPTD LYSATLAMYE ILQNGGLGSG GLNFDAKVRR SSFEPDDLLY 

       370        380        390        400        410        420 
AHVAGMDTFA RGLKAAHKLI EDRVFEDVIQ HRYRSFTEGI GLEIAEGRAD FKTLEQYALN 

       430        440 
NQPIKNESGR QERLKAILNQ YILQV 

« Hide

References

[1]"Completed Genome Sequence of Bacillus amyloliquefaciens IT45, a commercial strain used in horticulture."
Tompkins T.A., Barreau G., Mathieu O.
Submitted (JAN-2013) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: IT-45 EMBL AGF27626.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP004065 Genomic DNA. Translation: AGF27626.1.
RefSeqYP_007445507.1. NC_020272.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGF27626; AGF27626; KSO_010675.
GeneID14578963.
KEGGbami:KSO_010675.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01805.

Family and domain databases

Gene3D3.20.20.150. 1 hit.
HAMAPMF_00455. Xylose_isom_A.
InterProIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSPR00688. XYLOSISMRASE.
SUPFAMSSF51658. SSF51658. 1 hit.
TIGRFAMsTIGR02630. xylose_isom_A. 1 hit.
PROSITEPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameM1KS49_BACAM
AccessionPrimary (citable) accession number: M1KS49
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2013
Last sequence update: May 1, 2013
Last modified: June 11, 2014
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)