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M1KS49

- M1KS49_BACAM

UniProt

M1KS49 - M1KS49_BACAM

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Protein

Xylose isomerase

Gene

xylA

Organism
Bacillus amyloliquefaciens IT-45
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

D-xylopyranose = D-xylulose.UniRule annotationSAAS annotation

Cofactori

Note: Binds 2 magnesium ions per subunit.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei107 – 1071UniRule annotation
Active sitei110 – 1101UniRule annotation
Metal bindingi238 – 2381Magnesium 1UniRule annotation
Metal bindingi274 – 2741Magnesium 1UniRule annotation
Metal bindingi274 – 2741Magnesium 2UniRule annotation
Metal bindingi277 – 2771Magnesium 2UniRule annotation
Metal bindingi302 – 3021Magnesium 1UniRule annotation
Metal bindingi313 – 3131Magnesium 2UniRule annotation
Metal bindingi315 – 3151Magnesium 2UniRule annotation
Metal bindingi345 – 3451Magnesium 1UniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. xylose isomerase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. D-xylose metabolic process Source: UniProtKB-HAMAP
  2. pentose-phosphate shunt Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotation

Keywords - Biological processi

Carbohydrate metabolism, Pentose shuntUniRule annotation, Xylose metabolismUniRule annotation

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotation, Metal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
Gene namesi
Name:xylAUniRule annotation
ORF Names:KSO_010675Imported
OrganismiBacillus amyloliquefaciens IT-45Imported
Taxonomic identifieri1091041 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000006456: Chromosome

Subcellular locationi

Cytoplasm UniRule annotationSAAS annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotation

Interactioni

Subunit structurei

Homotetramer.UniRule annotationSAAS annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the xylose isomerase family.UniRule annotation

Phylogenomic databases

KOiK01805.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
HAMAPiMF_00455. Xylose_isom_A.
InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamiPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSiPR00688. XYLOSISMRASE.
SUPFAMiSSF51658. SSF51658. 1 hit.
TIGRFAMsiTIGR02630. xylose_isom_A. 1 hit.
PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

M1KS49-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAHSHSGSVN YFESVNKVIY EGKESTNPLA FKYYNSQEVI GGKTMKEHLR
60 70 80 90 100
FSIAYWHTFT ADGTDMFGAA TMQRPWDHYK GMDLARARVE AAFELFEKLD
110 120 130 140 150
APFFAFHDRD IAPEGSTLKE TNQNLDIILD MIKDYMRTSG VKLLWNTANM
160 170 180 190 200
FTNPRFVHGA ATSCNADVFA YAAAQVKKGL ETAKELGAEN YVFWGGREGY
210 220 230 240 250
ETLLNTDLKF ELDNMARFMH MAVDYAKEIG YIGQFLIEPK PKEPTTHQYD
260 270 280 290 300
TDAATTIAFL KQYGLDNHFK LNLEANHATL AGHTFEHELR MARVHGLLGS
310 320 330 340 350
VDANQGDPLL GWDTDEFPTD LYSATLAMYE ILQNGGLGSG GLNFDAKVRR
360 370 380 390 400
SSFEPDDLLY AHVAGMDTFA RGLKAAHKLI EDRVFEDVIQ HRYRSFTEGI
410 420 430 440
GLEIAEGRAD FKTLEQYALN NQPIKNESGR QERLKAILNQ YILQV
Length:445
Mass (Da):50,304
Last modified:May 1, 2013 - v1
Checksum:iF1E9521D363E60EC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP004065 Genomic DNA. Translation: AGF27626.1.
RefSeqiYP_007445507.1. NC_020272.1.

Genome annotation databases

EnsemblBacteriaiAGF27626; AGF27626; KSO_010675.
GeneIDi14578963.
KEGGibami:KSO_010675.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP004065 Genomic DNA. Translation: AGF27626.1 .
RefSeqi YP_007445507.1. NC_020272.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AGF27626 ; AGF27626 ; KSO_010675 .
GeneIDi 14578963.
KEGGi bami:KSO_010675.

Phylogenomic databases

KOi K01805.

Family and domain databases

Gene3Di 3.20.20.150. 1 hit.
HAMAPi MF_00455. Xylose_isom_A.
InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view ]
Pfami PF01261. AP_endonuc_2. 1 hit.
[Graphical view ]
PRINTSi PR00688. XYLOSISMRASE.
SUPFAMi SSF51658. SSF51658. 1 hit.
TIGRFAMsi TIGR02630. xylose_isom_A. 1 hit.
PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Completed Genome Sequence of Bacillus amyloliquefaciens IT45, a commercial strain used in horticulture."
    Tompkins T.A., Barreau G., Mathieu O.
    Submitted (JAN-2013) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: IT-45Imported.

Entry informationi

Entry nameiM1KS49_BACAM
AccessioniPrimary (citable) accession number: M1KS49
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2013
Last sequence update: May 1, 2013
Last modified: November 26, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3