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Protein

DNA-directed RNA polymerase subunit H

Gene

rpoH

Organism
Sulfolobus acidocaldarius Ron12/I
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.UniRule annotation

Catalytic activityi

Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1).UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionNucleotidyltransferaseUniRule annotationImported, Transferase
Biological processTranscription

Names & Taxonomyi

Protein namesi
Recommended name:
DNA-directed RNA polymerase subunit HUniRule annotation (EC:2.7.7.6UniRule annotation)
Gene namesi
Name:rpoHUniRule annotationImported
ORF Names:SacRon12I_03340Imported
OrganismiSulfolobus acidocaldarius Ron12/IImported
Taxonomic identifieri1028567 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiSulfolobalesSulfolobaceaeSulfolobus
Proteomesi
  • UP000011280 Componenti: Chromosome

Subcellular locationi

Keywords - Cellular componenti

DNA-directed RNA polymeraseUniRule annotationSAAS annotationImported

Structurei

3D structure databases

ProteinModelPortaliM1J0T4.
SMRiM1J0T4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini9 – 81RNA_pol_Rpb5_CInterPro annotationAdd BLAST73

Sequence similaritiesi

Belongs to the archaeal RpoH/eukaryotic RPB5 RNA polymerase subunit family.UniRule annotation

Phylogenomic databases

KOiK03053.

Family and domain databases

Gene3Di3.90.940.20. 1 hit.
HAMAPiMF_00025. RNApol_RpoH_RPB5. 1 hit.
InterProiView protein in InterPro
IPR000783. RNA_pol_subH/Rpb5_C.
IPR020608. RNA_pol_subH/Rpb5_CS.
IPR035913. RPB5-like.
IPR020609. RpoH/RPB5.
PfamiView protein in Pfam
PF01191. RNA_pol_Rpb5_C. 1 hit.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD005155. RNA_pol_subH/Rpb5_C. 1 hit.
SUPFAMiSSF55287. SSF55287. 1 hit.
PROSITEiView protein in PROSITE
PS01110. RNA_POL_H_23KD. 1 hit.

Sequencei

Sequence statusi: Complete.

M1J0T4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRSSSKKKID ISNHELVPKH EILQLEEAYK LVKELGIKPE QLPWIRASDP
60 70 80
VAKSIGAKPG DIIKITRKSP FTGESVTYRY VITG
Length:84
Mass (Da):9,460
Last modified:May 1, 2013 - v1
Checksum:i4B03C8B6FBA9FD9A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002818 Genomic DNA. Translation: AGE72916.1.
RefSeqiWP_011277576.1. NC_020247.1.

Genome annotation databases

EnsemblBacteriaiAGE72916; AGE72916; SacRon12I_03340.
GeneIDi3472540.
KEGGisacr:SacRon12I_03340.
PATRICifig|1028567.7.peg.657.

Similar proteinsi

Entry informationi

Entry nameiM1J0T4_9CREN
AccessioniPrimary (citable) accession number: M1J0T4
Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 2013
Last sequence update: May 1, 2013
Last modified: October 25, 2017
This is version 28 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported