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Protein
Submitted name:

Ribulose bisphosphate carboxylase, type III

Gene

Thena_0423

Organism
Thermodesulfobium narugense DSM 14796
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose bisphosphate carboxylase, type IIIImported (EC:4.1.1.39Imported)
Gene namesi
ORF Names:Thena_0423Imported
OrganismiThermodesulfobium narugense DSM 14796Imported
Taxonomic identifieri747365 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaThermoanaerobacteralesThermodesulfobiaceaeThermodesulfobium
ProteomesiUP000011765 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi747365.Thena_0423.

Structurei

3D structure databases

ProteinModelPortaliM1E6K1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01601.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPiMF_01133. RuBisCO_L_type3.
InterProiIPR017712. RuBisCO_III.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
TIGRFAMsiTIGR03326. rubisco_III. 1 hit.

Sequencei

Sequence statusi: Complete.

M1E6K1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSAKLNIKYT NFLDLSYVPK KNDVLAAFYV EPASGTDIKE AAGAVASESS
60 70 80 90 100
IGTWTDLATM KQSIWDELRA RVYSIEGNIV RIAYPDVLFE AANLPQFLSS
110 120 130 140 150
VAGNVFGMKA VENLRLLDIV LTQKFLDELK GPAFGVDGVR EVLGVKDRPL
160 170 180 190 200
VGTIVKPKLG LDPKEQAKVV YESLVGGLDL VKDDENLTHQ DFSNFDERVK
210 220 230 240 250
YSLDAVRRAE EETGEKKAYL PNVTAPTEEM LRRTALVKKE GGKYAMVDVI
260 270 280 290 300
TTGFAGVQSL RNANSGLILH AHRAMYASFA RSKKHGIHML VLSKLLRFSG
310 320 330 340 350
VDQLHIGTVV GKMEGDRDDV LVCHEALGSS DEMKVKTYLP HQEWGNMKSV
360 370 380 390 400
FSVASGGLHP GHTADLFKIF GKNAVFQYGG GVHGHPEGTR MGARAVRDSV
410 420
ECAVKGISLK EGAKSSKALE LALSKWGGA
Length:429
Mass (Da):46,698
Last modified:May 1, 2013 - v1
Checksum:iB11641742846FD52
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002690 Genomic DNA. Translation: AEE14065.1.
RefSeqiWP_013755793.1. NC_015499.1.
YP_004437196.1. NC_015499.1.

Genome annotation databases

EnsemblBacteriaiAEE14065; AEE14065; Thena_0423.
KEGGitnr:Thena_0423.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002690 Genomic DNA. Translation: AEE14065.1.
RefSeqiWP_013755793.1. NC_015499.1.
YP_004437196.1. NC_015499.1.

3D structure databases

ProteinModelPortaliM1E6K1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi747365.Thena_0423.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEE14065; AEE14065; Thena_0423.
KEGGitnr:Thena_0423.

Phylogenomic databases

KOiK01601.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPiMF_01133. RuBisCO_L_type3.
InterProiIPR017712. RuBisCO_III.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
TIGRFAMsiTIGR03326. rubisco_III. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: DSM 14796Imported.

Entry informationi

Entry nameiM1E6K1_9FIRM
AccessioniPrimary (citable) accession number: M1E6K1
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2013
Last sequence update: May 1, 2013
Last modified: June 24, 2015
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.