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Protein
Submitted name:

Envelope glycoprotein

Gene
N/A
Organism
Human immunodeficiency virus 1
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Envelope glycoproteinImported
OrganismiHuman immunodeficiency virus 1Imported
Taxonomic identifieri11676 [NCBI]
Taxonomic lineageiVirusesRetro-transcribing virusesRetroviridaeOrthoretrovirinaeLentivirusPrimate lentivirus group
Virus hostiHomo sapiens (Human) [TaxID: 9606]

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2LP7NMR-A/B/C1-59[»]
2M7WNMR-A/B/C1-59[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1 – 2626Fibritin_CInterPro annotationAdd
BLAST
Domaini31 – 5929GP41InterPro annotationAdd
BLAST

Family and domain databases

Gene3Di1.20.5.320. 1 hit.
InterProiIPR012284. 6PGD_dom_3.
IPR012473. Fibritin_C.
IPR000328. Retroviral_envelope_protein.
[Graphical view]
PfamiPF07921. Fibritin_C. 1 hit.
PF00517. GP41. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

M1E1E4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
GYIPEAPRDG QAYVRKDGEW VLLSTFLGSS GNEQELLELD KWASLWNWFN

ITNWLWYIK
Length:59
Mass (Da):7,006
Last modified:April 3, 2013 - v1
Checksum:iA56FF6874FEF2B37
GO

Cross-referencesi

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2LP7NMR-A/B/C1-59[»]
2M7WNMR-A/B/C1-59[»]
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di1.20.5.320. 1 hit.
InterProiIPR012284. 6PGD_dom_3.
IPR012473. Fibritin_C.
IPR000328. Retroviral_envelope_protein.
[Graphical view]
PfamiPF07921. Fibritin_C. 1 hit.
PF00517. GP41. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Structure of an HIV-1-neutralizing antibody target, the lipid-bound gp41 envelope membrane proximal region trimer."
    Reardon P.N., Sage H., Dennison S.M., Martin J.W., Donald B.R., Alam S.M., Haynes B.F., Spicer L.D.
    Proc. Natl. Acad. Sci. U.S.A. 111:1391-1396(2014) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY NMR.

Entry informationi

Entry nameiM1E1E4_9HIV1
AccessioniPrimary (citable) accession number: M1E1E4
Entry historyi
Integrated into UniProtKB/TrEMBL: April 3, 2013
Last sequence update: April 3, 2013
Last modified: May 11, 2016
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sourcesImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.