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M1ADS0

- M1ADS0_SOLTU

UniProt

M1ADS0 - M1ADS0_SOLTU

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Protein
Alpha-amylase
Gene
PGSC0003DMG400007974
Organism
Solanum tuberosum (Potato)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei200 – 2001Nucleophile By similarityUniRule annotation
Active sitei225 – 2251Proton donor By similarityUniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: InterPro
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
  2. response to abscisic acid Source: EnsemblPlants/Gramene
  3. response to gibberellin Source: EnsemblPlants/Gramene
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Name:PGSC0003DMG400007974Imported
OrganismiSolanum tuberosum (Potato)Imported
Taxonomic identifieri4113 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeSolanoideaeSolaneaeSolanum
ProteomesiUP000011115: Unplaced

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR012850. A-amylase_bs_C.
IPR013775. A-amylase_pln.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF07821. Alpha-amyl_C2. 1 hit.
PF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF001028. Alph-amls_plant. 1 hit.
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
SM00810. Alpha-amyl_C2. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

M1ADS0-1 [UniParc]FASTAAdd to Basket

« Hide

MNSIFPLCLI LSLFLPMFAS STVLFQGFNW ESSNKQGGWY NSLINLVPDL    50
AKAGVTHVWL PPSSHSVAPQ GYMPGRLYDL DASKFGNQQQ LKTLIKALHD 100
HGIKSVADIV INHRTADNKD SRGIYSIFEG GTSDDRLDWG PSFICKNDTQ 150
YSDGTGNPDT GLDFEPAPDI DHLNTRVQKE LSDWMNWLKS EIGFDGWRFD 200
FVRGYAPCIT KIYMRNTSPD FAVGEFWNSL AYGQDGKPEY NQDNHRNELV 250
DWVKNAGWAV TAFDFTTKGI LQAAVQGELW RLKDPNGKPP GMIGVLPRKA 300
VTFIDNHDTG STQNMWPFPS DKVMQGYAYI LTHPGIPSVF YDHFFDWGFK 350
DGISALISIR KRNRICATSN VQIMASDSDL YIAMIHHKII VKIGPKLDLG 400
NLIPPNYEVA TSGQDYAVWE QKA 423
Length:423
Mass (Da):47,527
Last modified:April 3, 2013 - v1
Checksum:i127498E958635A90
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
M81682 Genomic DNA. No translation available.
RefSeqiXP_006354888.1. XM_006354826.1.

Genome annotation databases

EnsemblPlantsiPGSC0003DMT400020591; PGSC0003DMT400020591; PGSC0003DMG400007974.
GeneIDi102598863.
KEGGisot:102598863.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
M81682 Genomic DNA. No translation available.
RefSeqi XP_006354888.1. XM_006354826.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi PGSC0003DMT400020591 ; PGSC0003DMT400020591 ; PGSC0003DMG400007974 .
GeneIDi 102598863.
KEGGi sot:102598863.

Phylogenomic databases

KOi K01176.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR012850. A-amylase_bs_C.
IPR013775. A-amylase_pln.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF07821. Alpha-amyl_C2. 1 hit.
PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PIRSFi PIRSF001028. Alph-amls_plant. 1 hit.
PRINTSi PR00110. ALPHAAMYLASE.
SMARTi SM00642. Aamy. 1 hit.
SM00810. Alpha-amyl_C2. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence and analysis of the tuber crop potato."
    The Potato Genome Sequencing Consortium
    Nature 475:189-195(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DM1-3 516 R44Imported.
  2. EnsemblPlants
    Submitted (FEB-2013) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: DM1-3 516 R44Imported.

Entry informationi

Entry nameiM1ADS0_SOLTU
AccessioniPrimary (citable) accession number: M1ADS0
Entry historyi
Integrated into UniProtKB/TrEMBL: April 3, 2013
Last sequence update: April 3, 2013
Last modified: July 9, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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