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Protein

Alpha-amylase

Gene

102598863

Organism
Solanum tuberosum (Potato)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

Cofactori

Ca2+UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei200NucleophileUniRule annotation1
Active sitei225Proton donorUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidaseUniRule annotation, Hydrolase
Biological processCarbohydrate metabolismUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Alternative name(s):
1,4-alpha-D-glucan glucanohydrolaseUniRule annotation
Gene namesi
Name:102598863Imported
OrganismiSolanum tuberosum (Potato)Imported
Taxonomic identifieri4113 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeSolanoideaeSolaneaeSolanum
Proteomesi
  • UP000011115 Componenti: Unassembled WGS sequence

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 21UniRule annotationAdd BLAST21
ChainiPRO_501060527022 – 423Alpha-amylaseUniRule annotationAdd BLAST402

Proteomic databases

PRIDEiM1ADS0.

Expressioni

Gene expression databases

ExpressionAtlasiM1ADS0. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi4113.PGSC0003DMT400020591.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini22 – 360AamyInterPro annotationAdd BLAST339
Domaini361 – 421Alpha-amyl_C2InterPro annotationAdd BLAST61

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Keywords - Domaini

SignalUniRule annotation

Phylogenomic databases

eggNOGiKOG0471. Eukaryota.
COG0366. LUCA.
InParanoidiM1ADS0.
KOiK01176.
OMAiVLNHKMG.
OrthoDBiEOG093600FS.

Family and domain databases

InterProiView protein in InterPro
IPR012850. A-amylase_bs_C.
IPR013775. A-amylase_pln.
IPR006046. Alpha_amylase.
IPR006047. Glyco_hydro_13_cat_dom.
IPR017853. Glycoside_hydrolase_SF.
PfamiView protein in Pfam
PF07821. Alpha-amyl_C2. 1 hit.
PF00128. Alpha-amylase. 1 hit.
PIRSFiPIRSF001028. Alph-amls_plant. 1 hit.
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiView protein in SMART
SM00642. Aamy. 1 hit.
SM00810. Alpha-amyl_C2. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

M1ADS0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNSIFPLCLI LSLFLPMFAS STVLFQGFNW ESSNKQGGWY NSLINLVPDL
60 70 80 90 100
AKAGVTHVWL PPSSHSVAPQ GYMPGRLYDL DASKFGNQQQ LKTLIKALHD
110 120 130 140 150
HGIKSVADIV INHRTADNKD SRGIYSIFEG GTSDDRLDWG PSFICKNDTQ
160 170 180 190 200
YSDGTGNPDT GLDFEPAPDI DHLNTRVQKE LSDWMNWLKS EIGFDGWRFD
210 220 230 240 250
FVRGYAPCIT KIYMRNTSPD FAVGEFWNSL AYGQDGKPEY NQDNHRNELV
260 270 280 290 300
DWVKNAGWAV TAFDFTTKGI LQAAVQGELW RLKDPNGKPP GMIGVLPRKA
310 320 330 340 350
VTFIDNHDTG STQNMWPFPS DKVMQGYAYI LTHPGIPSVF YDHFFDWGFK
360 370 380 390 400
DGISALISIR KRNRICATSN VQIMASDSDL YIAMIHHKII VKIGPKLDLG
410 420
NLIPPNYEVA TSGQDYAVWE QKA
Length:423
Mass (Da):47,527
Last modified:April 3, 2013 - v1
Checksum:i127498E958635A90
GO

Sequence databases

RefSeqiXP_006354888.1. XM_006354826.2.

Genome annotation databases

EnsemblPlantsiPGSC0003DMT400020591; PGSC0003DMT400020591; PGSC0003DMG400007974.
GeneIDi102598863.
GrameneiPGSC0003DMT400020591; PGSC0003DMT400020591; PGSC0003DMG400007974.
KEGGisot:102598863.

Similar proteinsi

Entry informationi

Entry nameiM1ADS0_SOLTU
AccessioniPrimary (citable) accession number: M1ADS0
Entry historyiIntegrated into UniProtKB/TrEMBL: April 3, 2013
Last sequence update: April 3, 2013
Last modified: October 25, 2017
This is version 33 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported