Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Transcription regulator

Gene

C435_20368

Organism
Haloarcula californiae ATCC 33799
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi33 – 52H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Transcription regulatorImported
Gene namesi
ORF Names:C435_20368Imported
OrganismiHaloarcula californiae ATCC 33799Imported
Taxonomic identifieri662475 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaHalobacteriaHalobacterialesHaloarculaceaeHaloarcula
Proteomesi
  • UP000011687 Componenti: Unassembled WGS sequence

Structurei

3D structure databases

ProteinModelPortaliM0JS46.
SMRiM0JS46.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini10 – 70HTH tetR-typeInterPro annotationAdd BLAST61

Phylogenomic databases

OrthoDBiPOG093Z09AA.

Family and domain databases

InterProiView protein in InterPro
IPR009057. Homeobox-like_sf.
IPR001647. HTH_TetR.
IPR036271. Tet_transcr_reg_TetR-rel_C_sf.
PfamiView protein in Pfam
PF00440. TetR_N. 1 hit.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiView protein in PROSITE
PS50977. HTH_TETR_2. 1 hit.

Sequencei

Sequence statusi: Complete.

M0JS46-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGPSDRTFS DQTEEIMQAT YRALREHGYA DLTIQRIADE YGKSTAAVHY
60 70 80 90 100
YYDTKDDLLA AFLDYLLERF VDSIHDVETT DPEARLNLLL DELLVKPQEN
110 120 130 140 150
PDLSVALLEM RSQAPYKEAF SDRFRQNDEY VRYMLKAVIN HGIDEGVFTD
160 170 180 190
VDAEHVTRSL LTIIDGARTR AVMLDDTEEL ETARQTASEY ADAMLQ
Length:196
Mass (Da):22,440
Last modified:April 3, 2013 - v1
Checksum:i0491F9C7C1853F25
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AOLS01000115 Genomic DNA. Translation: EMA10480.1.
RefSeqiWP_004966015.1. NZ_AOLS01000115.1.

Genome annotation databases

EnsemblBacteriaiEMA10480; EMA10480; C435_20368.
GeneIDi3127151.
PATRICifig|662475.6.peg.3983.

Similar proteinsi

Entry informationi

Entry nameiM0JS46_9EURY
AccessioniPrimary (citable) accession number: M0JS46
Entry historyiIntegrated into UniProtKB/TrEMBL: April 3, 2013
Last sequence update: April 3, 2013
Last modified: November 22, 2017
This is version 23 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteomeImported