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Protein
Submitted name:

Alpha-amylase

Gene

amyS2

Organism
Geobacillus sp. GHH01
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported (EC:3.2.1.1Imported)
Gene namesi
Name:amyS2Imported
ORF Names:GHH_c32570Imported
OrganismiGeobacillus sp. GHH01Imported
Taxonomic identifieri1233873 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeGeobacillus
ProteomesiUP000011251 Componenti: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF09154. DUF1939. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

L7ZW44-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIQKQKKRFL PHLLPLVVEV GVSSPKTMKD QPTLAVTFVD NHDTEPGQAL
60 70 80 90 100
QSWVDPWFKP LAYAFILTRQ EGYPCVFYGD YYGIPQYNIP SLKSKIDPLL
110 120 130 140 150
IARRDYAYGT QHDYLDHSDI IGWTREGVTE KPGSGLAALI TDGPGGSKWM
160 170 180 190 200
YVGKQHAGKV FYDLTGNRSD TVTINSDGWG EFKVNGGSVS VWVPRKTTVS
210 220
TIAWSITTRP WTDEFVRWTE PRLVAWP
Length:227
Mass (Da):25,640
Last modified:April 3, 2013 - v1
Checksum:i0135491442396178
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP004008 Genomic DNA. Translation: AGE23748.1.
RefSeqiWP_015375887.1. NC_020210.1.
YP_007403499.1. NC_020210.1.

Genome annotation databases

EnsemblBacteriaiAGE23748; AGE23748; GHH_c32570.
KEGGiggh:GHH_c32570.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP004008 Genomic DNA. Translation: AGE23748.1.
RefSeqiWP_015375887.1. NC_020210.1.
YP_007403499.1. NC_020210.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAGE23748; AGE23748; GHH_c32570.
KEGGiggh:GHH_c32570.

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF09154. DUF1939. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete Genome Sequence of Geobacillus sp. Strain GHH01, a Thermophilic Lipase-Secreting Bacterium."
    Wiegand S., Rabausch U., Chow J., Daniel R., Streit W.R., Liesegang H.
    Genome Announc. 1:E0009213-E0009213(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: GHH01Imported.

Entry informationi

Entry nameiL7ZW44_9BACI
AccessioniPrimary (citable) accession number: L7ZW44
Entry historyi
Integrated into UniProtKB/TrEMBL: April 3, 2013
Last sequence update: April 3, 2013
Last modified: April 1, 2015
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.