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Protein
Submitted name:

Nucleoporin 50 kDa

Gene

PAL_GLEAN10007157

Organism
Pteropus alecto (Black flying fox)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Nucleoporin 50 kDaImported
Gene namesi
ORF Names:PAL_GLEAN10007157Imported
OrganismiPteropus alecto (Black flying fox)Imported
Taxonomic identifieri9402 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaChiropteraMegachiropteraPteropodidaePteropodinaePteropus
Proteomesi
  • UP000010552 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini348 – 468RanBD1InterPro annotationAdd BLAST121

Phylogenomic databases

InParanoidiL5KBR3.
KOiK14295.

Family and domain databases

Gene3Di2.30.29.30. 1 hit.
InterProiView protein in InterPro
IPR015007. NUP2/50/61.
IPR011993. PH-like_dom_sf.
IPR000156. Ran_bind_dom.
PfamiView protein in Pfam
PF08911. NUP50. 1 hit.
PF00638. Ran_BP1. 1 hit.
SMARTiView protein in SMART
SM00160. RanBD. 1 hit.
SUPFAMiSSF50729. SSF50729. 1 hit.
PROSITEiView protein in PROSITE
PS50196. RANBD1. 1 hit.

Sequencei

Sequence statusi: Complete.

L5KBR3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKRIAEKEL TDRNWDQEDE AEEVGTFSVA SEEVLKNRAI KKAKRRNVGF
60 70 80 90 100
ESDSGGAFKG FKGLVAPSGG GGFSGFGAGA GAKPLEGLSN GTSMASASAF
110 120 130 140 150
SSAGAAPESK VTFGSVVANG PASLADKTIP NPKTNGDSQQ PSSSGLTSNA
160 170 180 190 200
AHRPSAYHKQ LAALNCSVRD WIVKHVNTNP LCDLTPIFKD YEKHLAGIEQ
210 220 230 240 250
QHGGGGSGSS DTSPSDAAVE TQAPSLFGST KLEQESAFLF HGNKAEGTSE
260 270 280 290 300
KMEAGPETRA EPSLGAASAS FNFGKKIESS VLGPLSSGPL TGFSFPSGNS
310 320 330 340 350
GLFSKDITQS KPVSSPFSAK TSENQAGGGS NDCKGGDEEE NDEPPKVVVT
360 370 380 390 400
EVKEEDAFYS KKCKLFYKKD NEFKEKGVGT LHLKPTVNQK TQLLVRADTN
410 420 430 440 450
LGNILLNVLI PPNMPCTRTG KNNVLIICVP NPPVDENNAT VPVTMLIRVK
460
TSEDADELHK ILLEKKDA
Length:468
Mass (Da):49,237
Last modified:March 6, 2013 - v1
Checksum:iD88AB095C8160F5D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KB030944 Genomic DNA. Translation: ELK07923.1.
RefSeqiXP_006917392.1. XM_006917330.2.

Genome annotation databases

GeneIDi102879853.
KEGGipale:102879853.

Similar proteinsi

Entry informationi

Entry nameiL5KBR3_PTEAL
AccessioniPrimary (citable) accession number: L5KBR3
Entry historyiIntegrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: November 22, 2017
This is version 16 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported