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Protein

General transcription factor IIH subunit 4

Gene

TFB2

Organism
Guillardia theta CCMP2712
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Component of the core-TFIIH basal transcription factor involved in nucleotide excision repair (NER) of DNA.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processDNA damage, DNA repairUniRule annotation, Transcription, Transcription regulationUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
General transcription factor IIH subunit 4UniRule annotation
Gene namesi
Name:TFB2Imported
ORF Names:GUITHDRAFT_104031Imported
OrganismiGuillardia theta CCMP2712Imported
Taxonomic identifieri905079 [NCBI]
Taxonomic lineageiEukaryotaCryptophytaPyrenomonadalesGeminigeraceaeGuillardia
Proteomesi
  • UP000011087 Componenti: Unassembled WGS sequence

Subcellular locationi

  • Nucleus UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

NucleusUniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the TFB2 family.UniRule annotation

Phylogenomic databases

KOiK03144.
OMAiYLEQYAH.

Family and domain databases

InterProiView protein in InterPro
IPR004598. TFIIH_p52/Tfb2.
PANTHERiPTHR13152. PTHR13152. 2 hits.
PfamiView protein in Pfam
PF03849. Tfb2. 1 hit.

Sequencei

Sequence statusi: Complete.

L1JP30-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRVVEDMAWE VCRTVGELPE SACSKLYENQ WACVSMMRLM PPLGRQLLMR
60 70 80 90 100
LVHLGQERVE LLRWVDEGEV QRQRLEEVVR KMEEVKILYL DEDVKESDGV
110 120 130 140 150
SVRINPTFSE RILQFLLQRD TSPWSKGRIM GDSPDTTAEE LQQWAQNRWE
160 170 180 190 200
SILHYMVSPG LDPMKRPEPG WKPTKWVRGI LVGEDKNGNS FMMSLQNLAP
210 220 230 240 250
KITAFGFQFL LRPLRNQILQ MLMHVLTKKG SENKDLQDSL SCIFQLSFCT
260 270 280 290 300
LGAGYRLDLL SRSNQELITS LHDLGAVYFK PNDRQYFFPT PLIVNLCTES
310 320 330 340 350
EVPSGPSTDA GVADEFSAEP AAGILRLFTR PIYKFPHMII AVITRESIRN
360 370 380 390 400
ALIIEYLRMH AHPQCLENWP IVPEVVTDQI CFWEQERCRI RAEPAVAYHN
410 420 430 440 450
FFSGEAHRAC EKEARRLKFN DKGPGEVAKR EACLYSDTSE QLLVVPEAAD
460
PLIRKFIETS INE
Length:463
Mass (Da):53,275
Last modified:March 6, 2013 - v1
Checksum:i199C16B01AFC85BB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
JH992979 Genomic DNA. Translation: EKX50217.1.
RefSeqiXP_005837197.1. XM_005837140.1.

Genome annotation databases

EnsemblProtistsiEKX50217; EKX50217; GUITHDRAFT_104031.
GeneIDi17306832.
KEGGigtt:GUITHDRAFT_104031.

Entry informationi

Entry nameiL1JP30_GUITH
AccessioniPrimary (citable) accession number: L1JP30
Entry historyiIntegrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: October 25, 2017
This is version 21 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported