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L0SLC2 (L0SLC2_STREE) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 8. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:nanA EMBL CCP36244.1
ORF Names:SPN034156_05750 EMBL CCP36244.1
OrganismStreptococcus pneumoniae SPN034156 [Complete proteome] EMBL CCP36244.1
Taxonomic identifier869303 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus

Protein attributes

Sequence length960 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Subcellular location

Secretedcell wall; Peptidoglycan-anchor By similarity SAAS SAAS019931.

Ontologies

Keywords
   Cellular componentSecreted SAAS SAAS019931
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular_componentcell wall

Inferred from electronic annotation. Source: UniProtKB-SubCell

extracellular region

Inferred from electronic annotation. Source: UniProtKB-KW

membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionexo-alpha-sialidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
L0SLC2 [UniParc].

Last modified March 6, 2013. Version 1.
Checksum: 860541C3B29526E4

FASTA960106,614
        10         20         30         40         50         60 
MNRSVQERKC RYSIRKLSVG AVSMIVGAVV FGTSPVLAQE GASEQPLANE TQLSGESSTL 

        70         80         90        100        110        120 
TDTEKSQPSS ETELSGNKQE QERKDKQEEK IPRDYYARDL ENVETVIEKE DVETNASNGQ 

       130        140        150        160        170        180 
RVDLSSELDK LKKLENATVH MEFKPDAKAP AFYNLFSVSS ATKKDEYFTM AVYNNTATLE 

       190        200        210        220        230        240 
GRGSDGKQFY NNYNDAPLKV KPGQWNSVTF TVEKPTAELP KGRVRLYVNG VLSRTSLRSG 

       250        260        270        280        290        300 
NFIKDMPDVT HVQIGATKRA NNTVWGSNLQ IRNLTVYNRA LTPEEVQKRS QLFKRSDLEK 

       310        320        330        340        350        360 
KLPEGAALTE KTDIFESGRN GKPNKDGIKS YRIPALLKTD KGTLIAGADE RRLHSSDWGD 

       370        380        390        400        410        420 
IGMVIRRSED NGKTWGDRVT ITNLRDNPKA SDPSIGSPVN IDMVLVQDPE TKRIFSIYDM 

       430        440        450        460        470        480 
FPEGKGIFGM SSQKEEAYKK IDGKTYQILY REGEKGAYTI RENGTVYTPD GKATDYRVVV 

       490        500        510        520        530        540 
DPVKPAYSDK GDLYKGNQLL GNIYFTTNKT SPFRIAKDSY LWMSYSDDDG KTWSAPQDIT 

       550        560        570        580        590        600 
PMVKADWMKF LGVGPGTGIV LRNGPHKGRI LIPVYTTNNV SHLNGSQSSR VIYSDDHGKT 

       610        620        630        640        650        660 
WHAGEAVNDN RQVDGQKIHS STMNNERAQN TESTVVQLNN GDVKLFMRGL TGDLQVATSK 

       670        680        690        700        710        720 
DGGVTWEKDI KRYPQVKDVY VQMSAIHTMH EGKEYIILSN AGGPKRENGM VHLARVEENG 

       730        740        750        760        770        780 
ELTWLKHNPI QKGEFAYNSL QELGNGEYGI LYEHTEKGQN AYTLSFRKFN WDFLSKDLIS 

       790        800        810        820        830        840 
PTEAKVKRTR EMGKGVIGLE FDSEVLVNKA PTLQLANGKT ATFLTQYDSK TLLFAVDKED 

       850        860        870        880        890        900 
IGQEIIGIAK GSIESMHNLP VNLAGARVPG GVNGSKAAVH EVPEFTGGVN GTEPAVHEIA 

       910        920        930        940        950        960 
EYKGSDSLVT LTTKEDYTYK APLAQQALPE TGNKESDLLA SLGLTAFFLG LFTLGKKREQ 

« Hide

References

[1]"Structure and dynamics of the pan-genome of Streptococcus pneumoniae and closely related species."
Donati C., Hiller N.L., Tettelin H., Muzzi A., Croucher N.J., Angiuoli S.V., Oggioni M., Dunning Hotopp J.C., Hu F.Z., Riley D., Covacci A., Mitchell T.J., Bentley S.D., Kilian M., Ehrlich G.D., Rappuoli R., Moxon E.R., Masignani V.
Genome Biol. 11:R107-R107(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: SNP034156 EMBL CCP36244.1.
[2]"Dominant Role of Nucleotide Substitution in the Diversification of Serotype 3 Pneumococci over Decades and during a Single Infection."
Croucher N.J., Mitchell A.M., Gould K.A., Inverarity D., Barquist L., Feltwell T., Fookes M.C., Harris S.R., Dordel J., Salter S.J., Browall S., Zemlickova H., Parkhill J., Normark S., Henriques-Normark B., Hinds J., Mitchell T.J., Bentley S.D.
PLoS Genet. 9:e1003868-e1003868(2013)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: SNP034156 EMBL CCP36244.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FQ312045 Genomic DNA. Translation: CCP36244.1.
RefSeqYP_007764892.1. NC_021006.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCCP36244; CCP36244; SPN034156_05750.
GeneID15313628.
KEGGspne:SPN034156_05750.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01186.

Family and domain databases

Gene3D2.120.10.10. 2 hits.
2.60.120.200. 1 hit.
InterProIPR008985. ConA-like_lec_gl_sf.
IPR013320. ConA-like_subgrp.
IPR004124. Glyco_hydro_33_N.
IPR005877. Gpos_YSIRK.
IPR001791. Laminin_G.
IPR019931. LPXTG_anchor.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERPTHR10628. PTHR10628. 1 hit.
PfamPF02973. Sialidase. 1 hit.
PF04650. YSIRK_signal. 1 hit.
[Graphical view]
SMARTSM00282. LamG. 1 hit.
[Graphical view]
SUPFAMSSF49899. SSF49899. 1 hit.
SSF50939. SSF50939. 2 hits.
TIGRFAMsTIGR01167. LPXTG_anchor. 1 hit.
TIGR01168. YSIRK_signal. 1 hit.
PROSITEPS50847. GRAM_POS_ANCHORING. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameL0SLC2_STREE
AccessionPrimary (citable) accession number: L0SLC2
Entry history
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: January 22, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)